Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNT1O60563 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNT1O60563 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.17■■□□□ 1.14
CCNT1O60563 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
CCNT1O60563 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.17■■□□□ 1.14
CCNT1O60563 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.17■■□□□ 1.14
CCNT1O60563 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.17■■□□□ 1.14
CCNT1O60563 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNT1O60563 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.17■■□□□ 1.14
CCNT1O60563 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNT1O60563 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
CCNT1O60563 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.17■■□□□ 1.14
CCNT1O60563 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CCNT1O60563 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CCNT1O60563 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
CCNT1O60563 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.16■■□□□ 1.14
CCNT1O60563 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.16■■□□□ 1.14
CCNT1O60563 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.16■■□□□ 1.14
CCNT1O60563 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.16■■□□□ 1.14
CCNT1O60563 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CCNT1O60563 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.16■■□□□ 1.14
CCNT1O60563 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.16■■□□□ 1.14
CCNT1O60563 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.16■■□□□ 1.14
CCNT1O60563 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CCNT1O60563 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCNT1O60563 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CCNT1O60563 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CCNT1O60563 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CCNT1O60563 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CCNT1O60563 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
CCNT1O60563 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CCNT1O60563 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CCNT1O60563 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.15■■□□□ 1.14
CCNT1O60563 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.15■■□□□ 1.14
CCNT1O60563 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.15■■□□□ 1.14
CCNT1O60563 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.15■■□□□ 1.14
CCNT1O60563 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.15■■□□□ 1.14
CCNT1O60563 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNT1O60563 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.15■■□□□ 1.14
CCNT1O60563 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCNT1O60563 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CCNT1O60563 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.14■■□□□ 1.14
CCNT1O60563 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCNT1O60563 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
CCNT1O60563 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
CCNT1O60563 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CCNT1O60563 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.14■■□□□ 1.13
CCNT1O60563 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCNT1O60563 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.14■■□□□ 1.13
CCNT1O60563 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCNT1O60563 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.14■■□□□ 1.13
CCNT1O60563 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.14■■□□□ 1.13
CCNT1O60563 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCNT1O60563 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CCNT1O60563 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.14■■□□□ 1.13
CCNT1O60563 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCNT1O60563 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CCNT1O60563 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCNT1O60563 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CCNT1O60563 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CCNT1O60563 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNT1O60563 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.13■■□□□ 1.13
CCNT1O60563 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNT1O60563 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCNT1O60563 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
CCNT1O60563 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNT1O60563 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNT1O60563 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCNT1O60563 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
CCNT1O60563 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.13■■□□□ 1.13
CCNT1O60563 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNT1O60563 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CCNT1O60563 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNT1O60563 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNT1O60563 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNT1O60563 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
CCNT1O60563 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms