Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC28A2O43868 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC28A2O43868 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A2O43868 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A2O43868 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC28A2O43868 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SLC28A2O43868 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A2O43868 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC28A2O43868 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A2O43868 AL355355.2-201ENST00000442321 338 ntBASIC18.77■□□□□ 0.6
SLC28A2O43868 KRT18P57-201ENST00000443599 1254 ntBASIC18.77■□□□□ 0.6
SLC28A2O43868 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A2O43868 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC28A2O43868 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A2O43868 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC28A2O43868 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC28A2O43868 AC145285.6-201ENST00000604632 637 ntBASIC18.77■□□□□ 0.6
SLC28A2O43868 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A2O43868 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A2O43868 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A2O43868 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC28A2O43868 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC28A2O43868 CYP21A1P-202ENST00000354927 1481 ntBASIC18.77■□□□□ 0.59
SLC28A2O43868 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC28A2O43868 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.77■□□□□ 0.59
SLC28A2O43868 AC138932.1-201ENST00000534164 6830 ntBASIC18.77■□□□□ 0.59
SLC28A2O43868 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.59
SLC28A2O43868 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC28A2O43868 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC28A2O43868 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC28A2O43868 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC28A2O43868 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC28A2O43868 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC28A2O43868 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.76■□□□□ 0.59
SLC28A2O43868 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.76■□□□□ 0.59
SLC28A2O43868 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC28A2O43868 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC28A2O43868 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A2O43868 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A2O43868 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A2O43868 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SLC28A2O43868 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A2O43868 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A2O43868 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC28A2O43868 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A2O43868 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC28A2O43868 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SLC28A2O43868 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC28A2O43868 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A2O43868 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.75■□□□□ 0.59
SLC28A2O43868 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A2O43868 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC28A2O43868 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC28A2O43868 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SLC28A2O43868 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC28A2O43868 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC28A2O43868 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A2O43868 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SLC28A2O43868 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A2O43868 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A2O43868 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC28A2O43868 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC28A2O43868 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SLC28A2O43868 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A2O43868 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A2O43868 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC28A2O43868 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SLC28A2O43868 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
SLC28A2O43868 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A2O43868 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC28A2O43868 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC28A2O43868 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A2O43868 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC28A2O43868 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A2O43868 NTF6B-201ENST00000591913 560 ntBASIC18.74■□□□□ 0.59
SLC28A2O43868 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC28A2O43868 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A2O43868 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A2O43868 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A2O43868 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A2O43868 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A2O43868 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SLC28A2O43868 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms