Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRAF3IP2O43734 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
TRAF3IP2O43734 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAF3IP2O43734 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.39■□□□□ 0.38
TRAF3IP2O43734 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
TRAF3IP2O43734 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAF3IP2O43734 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAF3IP2O43734 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 AC093484.2-201ENST00000580996 2166 ntBASIC17.38■□□□□ 0.37
TRAF3IP2O43734 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 AC116562.4-201ENST00000641316 2276 ntBASIC17.38■□□□□ 0.37
TRAF3IP2O43734 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAF3IP2O43734 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 AC128676.1-201ENST00000454392 318 ntBASIC17.37■□□□□ 0.37
TRAF3IP2O43734 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 Z82202.1-201ENST00000623446 1880 ntBASIC17.37■□□□□ 0.37
TRAF3IP2O43734 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 KRT8P8-201ENST00000434750 1448 ntBASIC17.37■□□□□ 0.37
TRAF3IP2O43734 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 NBPF21P-201ENST00000425093 1451 ntBASIC17.37■□□□□ 0.37
TRAF3IP2O43734 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAF3IP2O43734 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 AC239809.2-201ENST00000415381 517 ntBASIC17.36■□□□□ 0.37
TRAF3IP2O43734 TUBB8P6-201ENST00000436895 1288 ntBASIC17.36■□□□□ 0.37
TRAF3IP2O43734 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 AL023875.1-201ENST00000640777 796 ntBASIC17.36■□□□□ 0.37
TRAF3IP2O43734 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
TRAF3IP2O43734 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms