Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTRA2O43464 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTRA2O43464 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTRA2O43464 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.71■□□□□ 0.75
HTRA2O43464 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTRA2O43464 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.71■□□□□ 0.75
HTRA2O43464 AC087289.5-201ENST00000586076 3175 ntBASIC19.71■□□□□ 0.75
HTRA2O43464 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.7■□□□□ 0.74
HTRA2O43464 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.7■□□□□ 0.74
HTRA2O43464 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.7■□□□□ 0.74
HTRA2O43464 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.7■□□□□ 0.74
HTRA2O43464 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.7■□□□□ 0.74
HTRA2O43464 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.7■□□□□ 0.74
HTRA2O43464 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.7■□□□□ 0.74
HTRA2O43464 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.7■□□□□ 0.74
HTRA2O43464 AP006294.2-201ENST00000641667 209 ntBASIC19.7■□□□□ 0.74
HTRA2O43464 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.7■□□□□ 0.74
HTRA2O43464 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
HTRA2O43464 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 HTR7P1-201ENST00000538670 1336 ntBASIC19.7■□□□□ 0.74
HTRA2O43464 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.7■□□□□ 0.74
HTRA2O43464 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTRA2O43464 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HTRA2O43464 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 AL020996.1-203ENST00000536896 2307 ntBASIC19.69■□□□□ 0.74
HTRA2O43464 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.69■□□□□ 0.74
HTRA2O43464 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HTRA2O43464 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HTRA2O43464 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HTRA2O43464 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HTRA2O43464 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.69■□□□□ 0.74
HTRA2O43464 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.69■□□□□ 0.74
HTRA2O43464 AC008550.1-201ENST00000511500 884 ntBASIC19.69■□□□□ 0.74
HTRA2O43464 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.69■□□□□ 0.74
HTRA2O43464 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.69■□□□□ 0.74
HTRA2O43464 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.69■□□□□ 0.74
HTRA2O43464 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTRA2O43464 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HTRA2O43464 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 KRT8P8-201ENST00000434750 1448 ntBASIC19.68■□□□□ 0.74
HTRA2O43464 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.68■□□□□ 0.74
HTRA2O43464 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HTRA2O43464 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.68■□□□□ 0.74
HTRA2O43464 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HTRA2O43464 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.68■□□□□ 0.74
HTRA2O43464 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.68■□□□□ 0.74
HTRA2O43464 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.68■□□□□ 0.74
HTRA2O43464 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.68■□□□□ 0.74
HTRA2O43464 AL353708.3-201ENST00000610272 989 ntBASIC19.68■□□□□ 0.74
HTRA2O43464 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.68■□□□□ 0.74
HTRA2O43464 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.68■□□□□ 0.74
HTRA2O43464 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTRA2O43464 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
HTRA2O43464 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
HTRA2O43464 AL135905.2-201ENST00000584934 1404 ntBASIC19.68■□□□□ 0.74
HTRA2O43464 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTRA2O43464 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HTRA2O43464 AC125437.2-201ENST00000625180 2167 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms