Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHGDHO43175 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.39■□□□□ 0.7
PHGDHO43175 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHGDHO43175 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PHGDHO43175 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PHGDHO43175 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.39■□□□□ 0.69
PHGDHO43175 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.39■□□□□ 0.69
PHGDHO43175 AC005829.2-201ENST00000571422 1056 ntBASIC19.39■□□□□ 0.69
PHGDHO43175 AC006557.6-201ENST00000623071 864 ntBASIC19.39■□□□□ 0.69
PHGDHO43175 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.39■□□□□ 0.69
PHGDHO43175 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.39■□□□□ 0.69
PHGDHO43175 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHGDHO43175 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.39■□□□□ 0.69
PHGDHO43175 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PHGDHO43175 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.38■□□□□ 0.69
PHGDHO43175 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.38■□□□□ 0.69
PHGDHO43175 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.38■□□□□ 0.69
PHGDHO43175 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PHGDHO43175 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.38■□□□□ 0.69
PHGDHO43175 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PHGDHO43175 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.38■□□□□ 0.69
PHGDHO43175 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.38■□□□□ 0.69
PHGDHO43175 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.38■□□□□ 0.69
PHGDHO43175 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.38■□□□□ 0.69
PHGDHO43175 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.38■□□□□ 0.69
PHGDHO43175 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PHGDHO43175 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.38■□□□□ 0.69
PHGDHO43175 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
PHGDHO43175 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHGDHO43175 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
PHGDHO43175 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHGDHO43175 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.37■□□□□ 0.69
PHGDHO43175 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PHGDHO43175 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PHGDHO43175 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHGDHO43175 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.37■□□□□ 0.69
PHGDHO43175 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.37■□□□□ 0.69
PHGDHO43175 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHGDHO43175 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.37■□□□□ 0.69
PHGDHO43175 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHGDHO43175 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PHGDHO43175 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.37■□□□□ 0.69
PHGDHO43175 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHGDHO43175 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PHGDHO43175 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHGDHO43175 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PHGDHO43175 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.37■□□□□ 0.69
PHGDHO43175 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.37■□□□□ 0.69
PHGDHO43175 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.37■□□□□ 0.69
PHGDHO43175 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.37■□□□□ 0.69
PHGDHO43175 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PHGDHO43175 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PHGDHO43175 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.37■□□□□ 0.69
PHGDHO43175 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PHGDHO43175 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PHGDHO43175 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHGDHO43175 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PHGDHO43175 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.36■□□□□ 0.69
PHGDHO43175 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PHGDHO43175 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHGDHO43175 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.36■□□□□ 0.69
PHGDHO43175 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.36■□□□□ 0.69
PHGDHO43175 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHGDHO43175 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.36■□□□□ 0.69
PHGDHO43175 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.36■□□□□ 0.69
PHGDHO43175 AC073210.2-201ENST00000430369 194 ntBASIC19.36■□□□□ 0.69
PHGDHO43175 GUSBP6-202ENST00000438529 1198 ntBASIC19.36■□□□□ 0.69
PHGDHO43175 AC091874.3-201ENST00000512672 1195 ntBASIC19.36■□□□□ 0.69
PHGDHO43175 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PHGDHO43175 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.36■□□□□ 0.69
PHGDHO43175 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.36■□□□□ 0.69
PHGDHO43175 AC092118.2-201ENST00000613495 667 ntBASIC19.36■□□□□ 0.69
PHGDHO43175 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHGDHO43175 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PHGDHO43175 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms