Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC3O15379 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.98■□□□□ 0.63
HDAC3O15379 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.98■□□□□ 0.63
HDAC3O15379 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC3O15379 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC3O15379 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HDAC3O15379 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HDAC3O15379 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.98■□□□□ 0.63
HDAC3O15379 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HDAC3O15379 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.97■□□□□ 0.63
HDAC3O15379 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.97■□□□□ 0.63
HDAC3O15379 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
HDAC3O15379 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HDAC3O15379 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HDAC3O15379 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.97■□□□□ 0.63
HDAC3O15379 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.97■□□□□ 0.63
HDAC3O15379 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HDAC3O15379 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.97■□□□□ 0.63
HDAC3O15379 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HDAC3O15379 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HDAC3O15379 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HDAC3O15379 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
HDAC3O15379 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HDAC3O15379 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HDAC3O15379 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 AL589743.5-201ENST00000616611 1050 ntBASIC18.96■□□□□ 0.63
HDAC3O15379 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.96■□□□□ 0.63
HDAC3O15379 AC116351.2-201ENST00000606540 1585 ntBASIC18.96■□□□□ 0.63
HDAC3O15379 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.96■□□□□ 0.63
HDAC3O15379 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HDAC3O15379 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HDAC3O15379 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HDAC3O15379 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.95■□□□□ 0.62
HDAC3O15379 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.95■□□□□ 0.62
HDAC3O15379 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HDAC3O15379 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HDAC3O15379 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HDAC3O15379 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.95■□□□□ 0.62
HDAC3O15379 AL355472.2-201ENST00000422958 438 ntBASIC18.95■□□□□ 0.62
HDAC3O15379 ZNRF2P3-201ENST00000424200 374 ntBASIC18.95■□□□□ 0.62
HDAC3O15379 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.95■□□□□ 0.62
HDAC3O15379 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 AC069236.1-201ENST00000604339 616 ntBASIC18.95■□□□□ 0.62
HDAC3O15379 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.95■□□□□ 0.62
HDAC3O15379 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HDAC3O15379 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.95■□□□□ 0.62
HDAC3O15379 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HDAC3O15379 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.95■□□□□ 0.62
HDAC3O15379 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HDAC3O15379 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC3O15379 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC3O15379 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC3O15379 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.94■□□□□ 0.62
HDAC3O15379 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC3O15379 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HDAC3O15379 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms