Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFA1O15239 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
NDUFA1O15239 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFA1O15239 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.34□□□□□ -0.27
NDUFA1O15239 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.34□□□□□ -0.27
NDUFA1O15239 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.34□□□□□ -0.27
NDUFA1O15239 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.34□□□□□ -0.27
NDUFA1O15239 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
NDUFA1O15239 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
NDUFA1O15239 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFA1O15239 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NDUFA1O15239 AC019069.1-201ENST00000610008 1333 ntBASIC13.34□□□□□ -0.27
NDUFA1O15239 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFA1O15239 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NDUFA1O15239 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
NDUFA1O15239 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NDUFA1O15239 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 HTR7P1-202ENST00000624664 4411 ntBASIC13.33□□□□□ -0.28
NDUFA1O15239 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.33□□□□□ -0.28
NDUFA1O15239 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NDUFA1O15239 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NDUFA1O15239 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.33□□□□□ -0.28
NDUFA1O15239 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.33□□□□□ -0.28
NDUFA1O15239 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.33□□□□□ -0.28
NDUFA1O15239 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.33□□□□□ -0.28
NDUFA1O15239 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.33□□□□□ -0.28
NDUFA1O15239 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.33□□□□□ -0.28
NDUFA1O15239 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NDUFA1O15239 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NDUFA1O15239 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
NDUFA1O15239 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NDUFA1O15239 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFA1O15239 AL390961.4-201ENST00000623958 2535 ntBASIC13.33□□□□□ -0.28
NDUFA1O15239 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NDUFA1O15239 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NDUFA1O15239 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFA1O15239 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
NDUFA1O15239 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NDUFA1O15239 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NDUFA1O15239 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
NDUFA1O15239 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA1O15239 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
NDUFA1O15239 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFA1O15239 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.32□□□□□ -0.28
NDUFA1O15239 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.32□□□□□ -0.28
NDUFA1O15239 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA1O15239 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms