Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.61■□□□□ 0.57
RTCAO00442 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RTCAO00442 POU5F1P3-201ENST00000428824 1078 ntBASIC18.61■□□□□ 0.57
RTCAO00442 TSPY20P-201ENST00000450910 630 ntBASIC18.61■□□□□ 0.57
RTCAO00442 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.61■□□□□ 0.57
RTCAO00442 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.61■□□□□ 0.57
RTCAO00442 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.61■□□□□ 0.57
RTCAO00442 MTDHP1-201ENST00000605323 784 ntBASIC18.61■□□□□ 0.57
RTCAO00442 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
RTCAO00442 AC073648.6-201ENST00000641589 218 ntBASIC18.61■□□□□ 0.57
RTCAO00442 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RTCAO00442 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RTCAO00442 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.61■□□□□ 0.57
RTCAO00442 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RTCAO00442 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTCAO00442 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RTCAO00442 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RTCAO00442 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTCAO00442 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RTCAO00442 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTCAO00442 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTCAO00442 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
RTCAO00442 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.6■□□□□ 0.57
RTCAO00442 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTCAO00442 YBX1P10-201ENST00000444752 975 ntBASIC18.6■□□□□ 0.57
RTCAO00442 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.6■□□□□ 0.57
RTCAO00442 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.6■□□□□ 0.57
RTCAO00442 PRKY-204ENST00000533551 1019 ntBASIC18.6■□□□□ 0.57
RTCAO00442 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTCAO00442 AL023875.1-201ENST00000640777 796 ntBASIC18.6■□□□□ 0.57
RTCAO00442 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RTCAO00442 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTCAO00442 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.6■□□□□ 0.57
RTCAO00442 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTCAO00442 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTCAO00442 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RTCAO00442 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTCAO00442 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RTCAO00442 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RTCAO00442 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.59■□□□□ 0.57
RTCAO00442 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.59■□□□□ 0.57
RTCAO00442 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.59■□□□□ 0.57
RTCAO00442 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RTCAO00442 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RTCAO00442 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.59■□□□□ 0.57
RTCAO00442 AC128676.1-201ENST00000454392 318 ntBASIC18.59■□□□□ 0.57
RTCAO00442 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.59■□□□□ 0.57
RTCAO00442 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.59■□□□□ 0.57
RTCAO00442 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.59■□□□□ 0.57
RTCAO00442 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.59■□□□□ 0.57
RTCAO00442 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.59■□□□□ 0.57
RTCAO00442 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.59■□□□□ 0.57
RTCAO00442 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.59■□□□□ 0.57
RTCAO00442 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.59■□□□□ 0.57
RTCAO00442 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTCAO00442 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTCAO00442 Z82202.1-201ENST00000623446 1880 ntBASIC18.58■□□□□ 0.57
RTCAO00442 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.58■□□□□ 0.57
RTCAO00442 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.58■□□□□ 0.57
RTCAO00442 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RTCAO00442 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.58■□□□□ 0.56
RTCAO00442 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.58■□□□□ 0.56
RTCAO00442 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
RTCAO00442 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.58■□□□□ 0.56
RTCAO00442 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.58■□□□□ 0.56
RTCAO00442 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.58■□□□□ 0.56
RTCAO00442 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.58■□□□□ 0.56
RTCAO00442 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTCAO00442 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms