Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNB4O00305 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CACNB4O00305 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNB4O00305 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CACNB4O00305 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNB4O00305 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CACNB4O00305 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CACNB4O00305 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CACNB4O00305 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 MMP23A-201ENST00000234610 1017 ntBASIC19.28■□□□□ 0.68
CACNB4O00305 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 AC087499.1-201ENST00000418141 1075 ntBASIC19.28■□□□□ 0.68
CACNB4O00305 ECEL1P3-201ENST00000427961 737 ntBASIC19.28■□□□□ 0.68
CACNB4O00305 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.28■□□□□ 0.68
CACNB4O00305 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.28■□□□□ 0.68
CACNB4O00305 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.28■□□□□ 0.68
CACNB4O00305 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNB4O00305 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.28■□□□□ 0.68
CACNB4O00305 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CACNB4O00305 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNB4O00305 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNB4O00305 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.28■□□□□ 0.68
CACNB4O00305 FSCN1P1-201ENST00000568912 1481 ntBASIC19.28■□□□□ 0.68
CACNB4O00305 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB4O00305 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB4O00305 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNB4O00305 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CACNB4O00305 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CACNB4O00305 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB4O00305 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB4O00305 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB4O00305 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB4O00305 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB4O00305 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CACNB4O00305 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.27■□□□□ 0.68
CACNB4O00305 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.27■□□□□ 0.68
CACNB4O00305 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB4O00305 AC133561.5-201ENST00000635547 218 ntBASIC19.27■□□□□ 0.68
CACNB4O00305 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNB4O00305 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CACNB4O00305 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CACNB4O00305 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CACNB4O00305 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB4O00305 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CACNB4O00305 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
CACNB4O00305 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB4O00305 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
CACNB4O00305 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB4O00305 AC099778.1-201ENST00000568593 1911 ntBASIC19.26■□□□□ 0.67
CACNB4O00305 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CACNB4O00305 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB4O00305 AC004980.1-204ENST00000429707 299 ntBASIC19.26■□□□□ 0.67
CACNB4O00305 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNB4O00305 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.26■□□□□ 0.67
CACNB4O00305 HLA-A-209ENST00000638375 975 ntBASIC19.26■□□□□ 0.67
CACNB4O00305 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB4O00305 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNB4O00305 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CACNB4O00305 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB4O00305 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB4O00305 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB4O00305 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNB4O00305 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNB4O00305 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNB4O00305 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CACNB4O00305 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CACNB4O00305 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNB4O00305 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNB4O00305 AP000525.1-201ENST00000608286 694 ntBASIC19.25■□□□□ 0.67
CACNB4O00305 MIR6786-201ENST00000616843 113 ntBASIC19.25■□□□□ 0.67
CACNB4O00305 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.25■□□□□ 0.67
CACNB4O00305 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CACNB4O00305 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms