Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
DFFAO00273 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.06■□□□□ 0.8
DFFAO00273 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.06■□□□□ 0.8
DFFAO00273 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.06■□□□□ 0.8
DFFAO00273 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DFFAO00273 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
DFFAO00273 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
DFFAO00273 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.05■□□□□ 0.8
DFFAO00273 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
DFFAO00273 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.05■□□□□ 0.8
DFFAO00273 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.05■□□□□ 0.8
DFFAO00273 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.05■□□□□ 0.8
DFFAO00273 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.05■□□□□ 0.8
DFFAO00273 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.05■□□□□ 0.8
DFFAO00273 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DFFAO00273 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
DFFAO00273 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.05■□□□□ 0.8
DFFAO00273 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
DFFAO00273 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.05■□□□□ 0.8
DFFAO00273 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
DFFAO00273 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
DFFAO00273 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DFFAO00273 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
DFFAO00273 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DFFAO00273 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
DFFAO00273 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DFFAO00273 PRORSD1P-201ENST00000295112 541 ntBASIC20.04■□□□□ 0.8
DFFAO00273 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.04■□□□□ 0.8
DFFAO00273 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.04■□□□□ 0.8
DFFAO00273 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
DFFAO00273 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DFFAO00273 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.04■□□□□ 0.8
DFFAO00273 AC124016.1-201ENST00000609552 612 ntBASIC20.04■□□□□ 0.8
DFFAO00273 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.04■□□□□ 0.8
DFFAO00273 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DFFAO00273 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.04■□□□□ 0.8
DFFAO00273 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
DFFAO00273 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DFFAO00273 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DFFAO00273 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
DFFAO00273 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DFFAO00273 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DFFAO00273 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.04■□□□□ 0.8
DFFAO00273 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DFFAO00273 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.03■□□□□ 0.8
DFFAO00273 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
DFFAO00273 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
DFFAO00273 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
DFFAO00273 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
DFFAO00273 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
DFFAO00273 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.03■□□□□ 0.8
DFFAO00273 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.03■□□□□ 0.8
DFFAO00273 TUBB8P6-201ENST00000436895 1288 ntBASIC20.03■□□□□ 0.8
DFFAO00273 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.03■□□□□ 0.8
DFFAO00273 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.03■□□□□ 0.8
DFFAO00273 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DFFAO00273 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.03■□□□□ 0.8
DFFAO00273 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DFFAO00273 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
DFFAO00273 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.02■□□□□ 0.8
DFFAO00273 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
DFFAO00273 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.02■□□□□ 0.8
DFFAO00273 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DFFAO00273 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms