Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 YBX1P4-201ENST00000392794 808 ntBASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ABHD17AP3-201ENST00000503096 1137 ntBASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 MIR3181-201ENST00000578512 73 ntBASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AC010525.1-201ENST00000585559 441 ntBASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AC006333.2-201ENST00000607957 2099 ntBASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC12.35□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AC103724.3-201ENST00000564481 992 ntBASIC12.34□□□□□ -0.43
TMEM256-PLSCR3K7ERE1 AC099791.2-201ENST00000605725 427 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms