Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 AL049812.1-201ENST00000432563 2267 ntBASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM49D1C9J1S8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 AC006015.1-201ENST00000429970 570 ntBASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49D1C9J1S8 AC116351.2-201ENST00000606540 1585 ntBASIC19.52■□□□□ 0.71
TRIM49D1C9J1S8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM49D1C9J1S8 TEX21P-204ENST00000641479 1693 ntBASIC19.52■□□□□ 0.71
TRIM49D1C9J1S8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM49D1C9J1S8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM49D1C9J1S8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 OR10C1-204ENST00000622521 1039 ntBASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM49D1C9J1S8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 AC007322.1-201ENST00000426983 750 ntBASIC19.5■□□□□ 0.71
TRIM49D1C9J1S8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms