Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM5B3KS81 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM5B3KS81 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM5B3KS81 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM5B3KS81 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM5B3KS81 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM5B3KS81 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 C1QBPP2-201ENST00000528754 825 ntBASIC16.4■□□□□ 0.22
SRRM5B3KS81 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.4■□□□□ 0.22
SRRM5B3KS81 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM5B3KS81 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM5B3KS81 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM5B3KS81 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRRM5B3KS81 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.39■□□□□ 0.22
SRRM5B3KS81 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.39■□□□□ 0.21
SRRM5B3KS81 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM5B3KS81 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRRM5B3KS81 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.39■□□□□ 0.21
SRRM5B3KS81 KRT16P5-201ENST00000455284 522 ntBASIC16.39■□□□□ 0.21
SRRM5B3KS81 AC008550.1-201ENST00000511500 884 ntBASIC16.39■□□□□ 0.21
SRRM5B3KS81 RPPH1-201ENST00000516869 333 ntBASIC16.39■□□□□ 0.21
SRRM5B3KS81 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.39■□□□□ 0.21
SRRM5B3KS81 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.39■□□□□ 0.21
SRRM5B3KS81 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SRRM5B3KS81 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SRRM5B3KS81 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.39■□□□□ 0.21
SRRM5B3KS81 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM5B3KS81 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM5B3KS81 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 C1QL1P1-201ENST00000568105 661 ntBASIC16.38■□□□□ 0.21
SRRM5B3KS81 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM5B3KS81 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM5B3KS81 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.38■□□□□ 0.21
SRRM5B3KS81 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM5B3KS81 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM5B3KS81 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRRM5B3KS81 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SRRM5B3KS81 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.37■□□□□ 0.21
SRRM5B3KS81 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.37■□□□□ 0.21
SRRM5B3KS81 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 MIR718-201ENST00000390190 70 ntBASIC16.37■□□□□ 0.21
SRRM5B3KS81 AL596275.1-201ENST00000423464 877 ntBASIC16.37■□□□□ 0.21
SRRM5B3KS81 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.37■□□□□ 0.21
SRRM5B3KS81 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.37■□□□□ 0.21
SRRM5B3KS81 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SRRM5B3KS81 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRRM5B3KS81 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
SRRM5B3KS81 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM5B3KS81 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SRRM5B3KS81 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SRRM5B3KS81 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM5B3KS81 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM5B3KS81 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SRRM5B3KS81 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRRM5B3KS81 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms