Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 VENTXP5-201ENST00000523979 775 ntBASIC19.12■□□□□ 0.65
C4orf47A7E2U8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 AL023803.3-201ENST00000615559 522 ntBASIC19.12■□□□□ 0.65
C4orf47A7E2U8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf47A7E2U8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 PRSS44-201ENST00000515154 1146 ntBASIC19.11■□□□□ 0.65
C4orf47A7E2U8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.11■□□□□ 0.65
C4orf47A7E2U8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 KRT18P38-201ENST00000449496 1282 ntBASIC19.1■□□□□ 0.65
C4orf47A7E2U8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 HLA-A-209ENST00000638375 975 ntBASIC19.1■□□□□ 0.65
C4orf47A7E2U8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.1■□□□□ 0.65
C4orf47A7E2U8 FEM1AP4-201ENST00000443167 1987 ntBASIC19.1■□□□□ 0.65
C4orf47A7E2U8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.1■□□□□ 0.65
C4orf47A7E2U8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 AL136038.3-201ENST00000561909 1096 ntBASIC19.09■□□□□ 0.65
C4orf47A7E2U8 AL353719.1-201ENST00000566847 864 ntBASIC19.09■□□□□ 0.65
C4orf47A7E2U8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.09■□□□□ 0.65
C4orf47A7E2U8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.08■□□□□ 0.65
C4orf47A7E2U8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.08■□□□□ 0.65
C4orf47A7E2U8 AC121338.2-201ENST00000622535 1744 ntBASIC19.08■□□□□ 0.65
C4orf47A7E2U8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.08■□□□□ 0.65
C4orf47A7E2U8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C4orf47A7E2U8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C4orf47A7E2U8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C4orf47A7E2U8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
C4orf47A7E2U8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.08■□□□□ 0.64
C4orf47A7E2U8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.08■□□□□ 0.64
C4orf47A7E2U8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.08■□□□□ 0.64
C4orf47A7E2U8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
C4orf47A7E2U8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms