Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 AC007613.1-201ENST00000572811 2597 ntBASIC20.18■□□□□ 0.82
SRRM3A6NNA2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 CROCCP3-202ENST00000420820 1947 ntBASIC20.17■□□□□ 0.82
SRRM3A6NNA2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 RCN1P1-201ENST00000400413 996 ntBASIC20.17■□□□□ 0.82
SRRM3A6NNA2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 CYP2T3P-201ENST00000601990 817 ntBASIC20.17■□□□□ 0.82
SRRM3A6NNA2 AC133561.5-201ENST00000635547 218 ntBASIC20.17■□□□□ 0.82
SRRM3A6NNA2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.17■□□□□ 0.82
SRRM3A6NNA2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 AC138907.5-202ENST00000569484 235 ntBASIC20.16■□□□□ 0.82
SRRM3A6NNA2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SRRM3A6NNA2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 KRT18P35-201ENST00000510488 1269 ntBASIC20.15■□□□□ 0.82
SRRM3A6NNA2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SRRM3A6NNA2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms