Protein–RNA interactions for Protein: A6NIV6

LRRIQ4, Leucine-rich repeat and IQ domain-containing protein 4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRIQ4A6NIV6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LRRIQ4A6NIV6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
LRRIQ4A6NIV6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 AP003071.4-201ENST00000562276 1284 ntBASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRRIQ4A6NIV6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 AL445675.2-201ENST00000620291 557 ntBASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 HLA-A-209ENST00000638375 975 ntBASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.46■■□□□ 1.03
LRRIQ4A6NIV6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.45■■□□□ 1.03
LRRIQ4A6NIV6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LRRIQ4A6NIV6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRIQ4A6NIV6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.45■■□□□ 1.02
LRRIQ4A6NIV6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
LRRIQ4A6NIV6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
LRRIQ4A6NIV6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRIQ4A6NIV6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.45■■□□□ 1.02
LRRIQ4A6NIV6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.45■■□□□ 1.02
LRRIQ4A6NIV6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRRIQ4A6NIV6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRIQ4A6NIV6 NUDT16P1-203ENST00000513809 620 ntBASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms