Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC66A2RUB6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CCDC66A2RUB6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 AC026271.2-201ENST00000428091 497 ntBASIC21.03■□□□□ 0.96
CCDC66A2RUB6 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.03■□□□□ 0.96
CCDC66A2RUB6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 NTF6G-201ENST00000591094 616 ntBASIC21.03■□□□□ 0.96
CCDC66A2RUB6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 MIR6821-201ENST00000617625 74 ntBASIC21.03■□□□□ 0.96
CCDC66A2RUB6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC66A2RUB6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 AC007322.4-201ENST00000509611 723 ntBASIC21.02■□□□□ 0.96
CCDC66A2RUB6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC66A2RUB6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC66A2RUB6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.02■□□□□ 0.95
CCDC66A2RUB6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC66A2RUB6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 AC106820.2-201ENST00000563775 3264 ntBASIC21.01■□□□□ 0.95
CCDC66A2RUB6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 AC087623.3-201ENST00000607047 1098 ntBASIC21.01■□□□□ 0.95
CCDC66A2RUB6 AC013268.1-206ENST00000638368 961 ntBASIC21.01■□□□□ 0.95
CCDC66A2RUB6 AC112229.1-201ENST00000639295 961 ntBASIC21.01■□□□□ 0.95
CCDC66A2RUB6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC66A2RUB6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms