Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC189A1A4V9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.49■□□□□ 0.71
CCDC189A1A4V9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC189A1A4V9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC189A1A4V9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
CCDC189A1A4V9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC189A1A4V9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC189A1A4V9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC189A1A4V9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC189A1A4V9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC189A1A4V9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 AC005181.1-201ENST00000604782 1256 ntBASIC19.48■□□□□ 0.71
CCDC189A1A4V9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC189A1A4V9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 PHGDH-210ENST00000641115 1638 ntBASIC19.47■□□□□ 0.71
CCDC189A1A4V9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC189A1A4V9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 AC022517.1-201ENST00000592429 346 ntBASIC19.46■□□□□ 0.71
CCDC189A1A4V9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC189A1A4V9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC189A1A4V9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms