Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.04■□□□□ 0.32
SHISA3A0PJX4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.03■□□□□ 0.32
SHISA3A0PJX4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHISA3A0PJX4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.02■□□□□ 0.32
SHISA3A0PJX4 Z98044.1-201ENST00000632503 1764 ntBASIC17.02■□□□□ 0.32
SHISA3A0PJX4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SHISA3A0PJX4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHISA3A0PJX4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHISA3A0PJX4 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.02■□□□□ 0.32
SHISA3A0PJX4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.02■□□□□ 0.32
SHISA3A0PJX4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHISA3A0PJX4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.02■□□□□ 0.31
SHISA3A0PJX4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHISA3A0PJX4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHISA3A0PJX4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.02■□□□□ 0.31
SHISA3A0PJX4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHISA3A0PJX4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHISA3A0PJX4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHISA3A0PJX4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SHISA3A0PJX4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.02■□□□□ 0.31
SHISA3A0PJX4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHISA3A0PJX4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 AL512353.2-201ENST00000448759 1962 ntBASIC17.01■□□□□ 0.31
SHISA3A0PJX4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 AC016405.3-201ENST00000607710 860 ntBASIC17.01■□□□□ 0.31
SHISA3A0PJX4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHISA3A0PJX4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17■□□□□ 0.31
SHISA3A0PJX4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17■□□□□ 0.31
SHISA3A0PJX4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17■□□□□ 0.31
SHISA3A0PJX4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SHISA3A0PJX4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 COX20-201ENST00000366528 568 ntTSL 2 BASIC17■□□□□ 0.31
SHISA3A0PJX4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SHISA3A0PJX4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17■□□□□ 0.31
SHISA3A0PJX4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SHISA3A0PJX4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17■□□□□ 0.31
SHISA3A0PJX4 TERF1P2-201ENST00000583350 1212 ntBASIC17■□□□□ 0.31
SHISA3A0PJX4 UBE2DNL-204ENST00000602536 740 ntBASIC17■□□□□ 0.31
SHISA3A0PJX4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SHISA3A0PJX4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17■□□□□ 0.31
SHISA3A0PJX4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17■□□□□ 0.31
SHISA3A0PJX4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SHISA3A0PJX4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17■□□□□ 0.31
SHISA3A0PJX4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SHISA3A0PJX4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms