Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 TEX21P-204ENST00000641479 1693 ntBASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 AL390961.4-201ENST00000623958 2535 ntBASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 AC013268.1-206ENST00000638368 961 ntBASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 AC112229.1-201ENST00000639295 961 ntBASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 AC020763.4-201ENST00000623414 4170 ntBASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 AC093525.10-201ENST00000625130 1569 ntBASIC13.79□□□□□ -0.2
TRBV27A0A0K0K1C4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 AC104581.1-202ENST00000635932 2618 ntBASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 AL031598.1-201ENST00000561511 1773 ntBASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 Z98044.1-201ENST00000632503 1764 ntBASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 AC090164.3-201ENST00000610780 2143 ntBASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV27A0A0K0K1C4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV27A0A0K0K1C4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
TRBV27A0A0K0K1C4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV27A0A0K0K1C4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV27A0A0K0K1C4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV27A0A0K0K1C4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms