Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 AC011767.1-201ENST00000617410 1153 ntBASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 AC231657.2-201ENST00000624556 255 ntBASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 OR6D1P-202ENST00000641007 5290 ntBASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV21A0A0B4J279 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 OR10C1-204ENST00000622521 1039 ntBASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
TRAV21A0A0B4J279 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 AL355472.2-201ENST00000422958 438 ntBASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 AC007322.1-201ENST00000426983 750 ntBASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV21A0A0B4J279 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms