Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 RPS2P55-201ENST00000397318 883 ntBASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 KSR1P1-201ENST00000446298 240 ntBASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 AC107956.1-201ENST00000494359 873 ntBASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 AC233702.5-201ENST00000584107 538 ntBASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 AC073195.1-201ENST00000607241 877 ntBASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TRAV25A0A0B4J276 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV25A0A0B4J276 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 NIFKP9-201ENST00000419265 221 ntBASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 RPS2P4-201ENST00000476944 856 ntBASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 AF186192.3-201ENST00000583427 947 ntBASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV25A0A0B4J276 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms