Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AC093484.2-201ENST00000580996 2166 ntBASIC13.83□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 LETM1P2-201ENST00000597330 2178 ntBASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 MIR663A-201ENST00000385250 93 ntBASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AL512625.2-201ENST00000417533 625 ntBASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AF201337.1-201ENST00000520239 748 ntBASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AC093503.3-201ENST00000624917 2352 ntBASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 RAP2CP1-201ENST00000605103 478 ntBASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 AL121832.2-201ENST00000610979 668 ntBASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV8-3A0A0A6YYJ7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms