Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 AL031598.1-201ENST00000561511 1773 ntBASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 AC093525.10-201ENST00000625130 1569 ntBASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV5-3A0A0A0MS03 SDHAP1-207ENST00000440850 2000 ntBASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 MKRN4P-201ENST00000444706 1521 ntBASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV5-3A0A0A0MS03 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV5-3A0A0A0MS03 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.27■□□□□ 0.51
TRBV5-3A0A0A0MS03 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRBV5-3A0A0A0MS03 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV5-3A0A0A0MS03 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV5-3A0A0A0MS03 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC022517.1-201ENST00000592429 346 ntBASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV5-3A0A0A0MS03 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 BX276092.2-201ENST00000417668 665 ntBASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms