Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 AL137784.2-201ENST00000607332 1000 ntBASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 AC068880.1-201ENST00000507289 2297 ntBASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV9-2A0A087WT02 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 AC016769.1-201ENST00000409132 1010 ntBASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 KRT18P5-201ENST00000436075 1291 ntBASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 AC099398.1-201ENST00000567919 2776 ntBASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV9-2A0A087WT02 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 KRT18P11-201ENST00000435214 1283 ntBASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV9-2A0A087WT02 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV9-2A0A087WT02 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV9-2A0A087WT02 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRAV9-2A0A087WT02 TMEM179-206ENST00000616017 1645 ntBASIC14.48□□□□□ -0.09
TRAV9-2A0A087WT02 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV9-2A0A087WT02 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV9-2A0A087WT02 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms