Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF216Q9NWF9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RNF216Q9NWF9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
RNF216Q9NWF9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.61■■■□□ 2.17
RNF216Q9NWF9 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC28.61■■■□□ 2.17
RNF216Q9NWF9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RNF216Q9NWF9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
RNF216Q9NWF9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
RNF216Q9NWF9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RNF216Q9NWF9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF216Q9NWF9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF216Q9NWF9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
RNF216Q9NWF9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF216Q9NWF9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
RNF216Q9NWF9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.56■■■□□ 2.16
RNF216Q9NWF9 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC28.56■■■□□ 2.16
RNF216Q9NWF9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
RNF216Q9NWF9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.55■■■□□ 2.16
RNF216Q9NWF9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.55■■■□□ 2.16
RNF216Q9NWF9 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.55■■■□□ 2.16
RNF216Q9NWF9 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC28.55■■■□□ 2.16
RNF216Q9NWF9 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
RNF216Q9NWF9 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC28.55■■■□□ 2.16
RNF216Q9NWF9 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.55■■■□□ 2.16
RNF216Q9NWF9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
RNF216Q9NWF9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RNF216Q9NWF9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
RNF216Q9NWF9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.54■■■□□ 2.16
RNF216Q9NWF9 RN7SL602P-201ENST00000578326 324 ntBASIC28.54■■■□□ 2.16
RNF216Q9NWF9 HSD17B1P1-201ENST00000590052 955 ntBASIC28.54■■■□□ 2.16
RNF216Q9NWF9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF216Q9NWF9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.52■■■□□ 2.16
RNF216Q9NWF9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RNF216Q9NWF9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.52■■■□□ 2.16
RNF216Q9NWF9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
RNF216Q9NWF9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.51■■■□□ 2.15
RNF216Q9NWF9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.51■■■□□ 2.15
RNF216Q9NWF9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF216Q9NWF9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
RNF216Q9NWF9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.5■■■□□ 2.15
RNF216Q9NWF9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
RNF216Q9NWF9 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
RNF216Q9NWF9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
RNF216Q9NWF9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
RNF216Q9NWF9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RNF216Q9NWF9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
RNF216Q9NWF9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RNF216Q9NWF9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
RNF216Q9NWF9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RNF216Q9NWF9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
RNF216Q9NWF9 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC28.47■■■□□ 2.15
RNF216Q9NWF9 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.47■■■□□ 2.15
RNF216Q9NWF9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.47■■■□□ 2.15
RNF216Q9NWF9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
RNF216Q9NWF9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.47■■■□□ 2.15
RNF216Q9NWF9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF216Q9NWF9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF216Q9NWF9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF216Q9NWF9 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC28.46■■■□□ 2.15
RNF216Q9NWF9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF216Q9NWF9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
RNF216Q9NWF9 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC28.45■■■□□ 2.14
RNF216Q9NWF9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
RNF216Q9NWF9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
RNF216Q9NWF9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF216Q9NWF9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RNF216Q9NWF9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.43■■■□□ 2.14
RNF216Q9NWF9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
RNF216Q9NWF9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RNF216Q9NWF9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RNF216Q9NWF9 LINC00273-201ENST00000539813 1452 ntBASIC28.42■■■□□ 2.14
RNF216Q9NWF9 SERPINA7P1-201ENST00000443077 631 ntBASIC28.42■■■□□ 2.14
RNF216Q9NWF9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RNF216Q9NWF9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RNF216Q9NWF9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.41■■■□□ 2.14
RNF216Q9NWF9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
RNF216Q9NWF9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
RNF216Q9NWF9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.4■■■□□ 2.14
RNF216Q9NWF9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.4■■■□□ 2.14
RNF216Q9NWF9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
RNF216Q9NWF9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.4■■■□□ 2.14
RNF216Q9NWF9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.14
RNF216Q9NWF9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RNF216Q9NWF9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.39■■■□□ 2.14
RNF216Q9NWF9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
RNF216Q9NWF9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RNF216Q9NWF9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RNF216Q9NWF9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF216Q9NWF9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF216Q9NWF9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF216Q9NWF9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.37■■■□□ 2.13
RNF216Q9NWF9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.37■■■□□ 2.13
RNF216Q9NWF9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF216Q9NWF9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.37■■■□□ 2.13
RNF216Q9NWF9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF216Q9NWF9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.36■■■□□ 2.13
RNF216Q9NWF9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RNF216Q9NWF9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RNF216Q9NWF9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RNF216Q9NWF9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms