Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 MIR7108-201ENST00000614319 87 ntBASIC26.36■■□□□ 1.81
RETREG1Q9H6L5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.36■■□□□ 1.81
RETREG1Q9H6L5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RETREG1Q9H6L5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 DUX4L13-201ENST00000554103 1267 ntBASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 DUX4L15-201ENST00000611059 1267 ntBASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 DUX4L23-201ENST00000615195 1269 ntBASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 DUX4L24-201ENST00000617576 1269 ntBASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 DUX4L22-201ENST00000618238 1269 ntBASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 DUX4L20-201ENST00000619712 1269 ntBASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 DUX4L21-201ENST00000622058 1269 ntBASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 DUX4L10-201ENST00000622460 1267 ntBASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 DUX4L25-201ENST00000624915 1269 ntBASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RETREG1Q9H6L5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RETREG1Q9H6L5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.34■■□□□ 1.81
RETREG1Q9H6L5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RETREG1Q9H6L5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.33■■□□□ 1.81
RETREG1Q9H6L5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RETREG1Q9H6L5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.33■■□□□ 1.8
RETREG1Q9H6L5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
RETREG1Q9H6L5 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.32■■□□□ 1.8
RETREG1Q9H6L5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RETREG1Q9H6L5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
RETREG1Q9H6L5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RETREG1Q9H6L5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.31■■□□□ 1.8
RETREG1Q9H6L5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.31■■□□□ 1.8
RETREG1Q9H6L5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.31■■□□□ 1.8
RETREG1Q9H6L5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RETREG1Q9H6L5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RETREG1Q9H6L5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
RETREG1Q9H6L5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.29■■□□□ 1.8
RETREG1Q9H6L5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RETREG1Q9H6L5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RETREG1Q9H6L5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RETREG1Q9H6L5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RETREG1Q9H6L5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.29■■□□□ 1.8
RETREG1Q9H6L5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.28■■□□□ 1.8
RETREG1Q9H6L5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.28■■□□□ 1.8
RETREG1Q9H6L5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
RETREG1Q9H6L5 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.27■■□□□ 1.8
RETREG1Q9H6L5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RETREG1Q9H6L5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RETREG1Q9H6L5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
RETREG1Q9H6L5 ABCB10P3-201ENST00000561950 2166 ntBASIC26.27■■□□□ 1.8
RETREG1Q9H6L5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
RETREG1Q9H6L5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.25■■□□□ 1.79
RETREG1Q9H6L5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RETREG1Q9H6L5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.25■■□□□ 1.79
RETREG1Q9H6L5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RETREG1Q9H6L5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.24■■□□□ 1.79
RETREG1Q9H6L5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RETREG1Q9H6L5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.24■■□□□ 1.79
RETREG1Q9H6L5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RETREG1Q9H6L5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
RETREG1Q9H6L5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RETREG1Q9H6L5 MIR3648-2-201ENST00000581792 180 ntBASIC26.23■■□□□ 1.79
RETREG1Q9H6L5 MIR3648-1-201ENST00000615959 180 ntBASIC26.23■■□□□ 1.79
RETREG1Q9H6L5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RETREG1Q9H6L5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RETREG1Q9H6L5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.22■■□□□ 1.79
RETREG1Q9H6L5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RETREG1Q9H6L5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
RETREG1Q9H6L5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RETREG1Q9H6L5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RETREG1Q9H6L5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RETREG1Q9H6L5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.2■■□□□ 1.78
RETREG1Q9H6L5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.2■■□□□ 1.78
RETREG1Q9H6L5 AC100797.4-201ENST00000631653 1827 ntBASIC26.19■■□□□ 1.78
RETREG1Q9H6L5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RETREG1Q9H6L5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.19■■□□□ 1.78
RETREG1Q9H6L5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.19■■□□□ 1.78
RETREG1Q9H6L5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RETREG1Q9H6L5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RETREG1Q9H6L5 CR559946.2-201ENST00000623684 991 ntBASIC26.18■■□□□ 1.78
RETREG1Q9H6L5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RETREG1Q9H6L5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.18■■□□□ 1.78
RETREG1Q9H6L5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RETREG1Q9H6L5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RETREG1Q9H6L5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RETREG1Q9H6L5 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.17■■□□□ 1.78
RETREG1Q9H6L5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RETREG1Q9H6L5 AC110285.7-201ENST00000624417 1536 ntBASIC26.17■■□□□ 1.78
RETREG1Q9H6L5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RETREG1Q9H6L5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RETREG1Q9H6L5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.15■■□□□ 1.78
RETREG1Q9H6L5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RETREG1Q9H6L5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.15■■□□□ 1.78
RETREG1Q9H6L5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RETREG1Q9H6L5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RETREG1Q9H6L5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RETREG1Q9H6L5 AC008813.1-201ENST00000536597 885 ntBASIC26.14■■□□□ 1.78
RETREG1Q9H6L5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.14■■□□□ 1.78
RETREG1Q9H6L5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
RETREG1Q9H6L5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.14■■□□□ 1.77
RETREG1Q9H6L5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RETREG1Q9H6L5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.14■■□□□ 1.77
RETREG1Q9H6L5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RETREG1Q9H6L5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms