Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXC2Q99958 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.83■■□□□ 1.09
FOXC2Q99958 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.83■■□□□ 1.09
FOXC2Q99958 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FOXC2Q99958 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXC2Q99958 AC148477.6-201ENST00000623746 465 ntBASIC21.81■■□□□ 1.08
FOXC2Q99958 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FOXC2Q99958 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXC2Q99958 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXC2Q99958 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.8■■□□□ 1.08
FOXC2Q99958 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FOXC2Q99958 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
FOXC2Q99958 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.79■■□□□ 1.08
FOXC2Q99958 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FOXC2Q99958 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FOXC2Q99958 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXC2Q99958 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXC2Q99958 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
FOXC2Q99958 AC092296.2-201ENST00000589470 999 ntBASIC21.78■■□□□ 1.08
FOXC2Q99958 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
FOXC2Q99958 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FOXC2Q99958 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXC2Q99958 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
FOXC2Q99958 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.77■■□□□ 1.08
FOXC2Q99958 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.77■■□□□ 1.08
FOXC2Q99958 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXC2Q99958 ECEL1P2-201ENST00000461596 1295 ntBASIC21.76■■□□□ 1.07
FOXC2Q99958 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.76■■□□□ 1.07
FOXC2Q99958 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXC2Q99958 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FOXC2Q99958 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FOXC2Q99958 AL035685.1-201ENST00000636663 812 ntBASIC21.75■■□□□ 1.07
FOXC2Q99958 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FOXC2Q99958 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FOXC2Q99958 AC019069.1-201ENST00000610008 1333 ntBASIC21.74■■□□□ 1.07
FOXC2Q99958 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXC2Q99958 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXC2Q99958 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXC2Q99958 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXC2Q99958 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.73■■□□□ 1.07
FOXC2Q99958 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXC2Q99958 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXC2Q99958 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.73■■□□□ 1.07
FOXC2Q99958 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXC2Q99958 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXC2Q99958 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXC2Q99958 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXC2Q99958 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXC2Q99958 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.73■■□□□ 1.07
FOXC2Q99958 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXC2Q99958 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXC2Q99958 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXC2Q99958 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXC2Q99958 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
FOXC2Q99958 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.71■■□□□ 1.07
FOXC2Q99958 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.71■■□□□ 1.07
FOXC2Q99958 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXC2Q99958 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
FOXC2Q99958 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
FOXC2Q99958 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXC2Q99958 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.7■■□□□ 1.06
FOXC2Q99958 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXC2Q99958 AL592295.1-201ENST00000400984 884 ntBASIC21.7■■□□□ 1.06
FOXC2Q99958 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXC2Q99958 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXC2Q99958 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXC2Q99958 AC120057.4-201ENST00000624722 1615 ntBASIC21.69■■□□□ 1.06
FOXC2Q99958 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXC2Q99958 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXC2Q99958 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXC2Q99958 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXC2Q99958 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
FOXC2Q99958 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXC2Q99958 AC010864.1-201ENST00000609407 1511 ntBASIC21.67■■□□□ 1.06
FOXC2Q99958 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
FOXC2Q99958 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXC2Q99958 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
FOXC2Q99958 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.67■■□□□ 1.06
FOXC2Q99958 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXC2Q99958 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXC2Q99958 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXC2Q99958 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXC2Q99958 AC126177.7-201ENST00000547904 679 ntBASIC21.65■■□□□ 1.06
FOXC2Q99958 AL451085.2-201ENST00000605085 799 ntBASIC21.65■■□□□ 1.06
FOXC2Q99958 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXC2Q99958 AC110285.7-201ENST00000624417 1536 ntBASIC21.65■■□□□ 1.06
FOXC2Q99958 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FOXC2Q99958 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.64■■□□□ 1.05
FOXC2Q99958 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
FOXC2Q99958 AC129492.7-201ENST00000622992 756 ntBASIC21.64■■□□□ 1.05
FOXC2Q99958 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXC2Q99958 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXC2Q99958 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXC2Q99958 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXC2Q99958 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXC2Q99958 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXC2Q99958 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXC2Q99958 MIR219A2-201ENST00000608502 1504 ntBASIC21.63■■□□□ 1.05
FOXC2Q99958 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXC2Q99958 AC135983.2-203ENST00000454486 1613 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms