Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
DDX11Q96FC9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
DDX11Q96FC9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
DDX11Q96FC9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.4■■■□□ 2.46
DDX11Q96FC9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
DDX11Q96FC9 MIR3648-2-201ENST00000581792 180 ntBASIC30.39■■■□□ 2.46
DDX11Q96FC9 MIR3648-1-201ENST00000615959 180 ntBASIC30.39■■■□□ 2.46
DDX11Q96FC9 LINC01971-201ENST00000617888 1048 ntBASIC30.39■■■□□ 2.46
DDX11Q96FC9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.39■■■□□ 2.46
DDX11Q96FC9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
DDX11Q96FC9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.38■■■□□ 2.45
DDX11Q96FC9 MIR4449-201ENST00000578365 66 ntBASIC30.38■■■□□ 2.45
DDX11Q96FC9 AC016575.1-201ENST00000607026 382 ntBASIC30.38■■■□□ 2.45
DDX11Q96FC9 DUX4L11-201ENST00000611504 1267 ntBASIC30.38■■■□□ 2.45
DDX11Q96FC9 DUX4L12-201ENST00000614593 1267 ntBASIC30.38■■■□□ 2.45
DDX11Q96FC9 DUX4L14-201ENST00000621227 1267 ntBASIC30.38■■■□□ 2.45
DDX11Q96FC9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.37■■■□□ 2.45
DDX11Q96FC9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
DDX11Q96FC9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
DDX11Q96FC9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
DDX11Q96FC9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
DDX11Q96FC9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.34■■■□□ 2.45
DDX11Q96FC9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.34■■■□□ 2.45
DDX11Q96FC9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.33■■■□□ 2.45
DDX11Q96FC9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
DDX11Q96FC9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
DDX11Q96FC9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
DDX11Q96FC9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.31■■■□□ 2.44
DDX11Q96FC9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
DDX11Q96FC9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
DDX11Q96FC9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
DDX11Q96FC9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
DDX11Q96FC9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.29■■■□□ 2.44
DDX11Q96FC9 AC127502.1-201ENST00000399971 1502 ntBASIC30.28■■■□□ 2.44
DDX11Q96FC9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.28■■■□□ 2.44
DDX11Q96FC9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
DDX11Q96FC9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
DDX11Q96FC9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.27■■■□□ 2.44
DDX11Q96FC9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
DDX11Q96FC9 CR559946.2-201ENST00000623684 991 ntBASIC30.27■■■□□ 2.44
DDX11Q96FC9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
DDX11Q96FC9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.26■■■□□ 2.43
DDX11Q96FC9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
DDX11Q96FC9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.24■■■□□ 2.43
DDX11Q96FC9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.24■■■□□ 2.43
DDX11Q96FC9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
DDX11Q96FC9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.23■■■□□ 2.43
DDX11Q96FC9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
DDX11Q96FC9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
DDX11Q96FC9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.22■■■□□ 2.43
DDX11Q96FC9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
DDX11Q96FC9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.2■■■□□ 2.42
DDX11Q96FC9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
DDX11Q96FC9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
DDX11Q96FC9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
DDX11Q96FC9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
DDX11Q96FC9 DRD5P2-201ENST00000421395 2012 ntBASIC30.19■■■□□ 2.42
DDX11Q96FC9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
DDX11Q96FC9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
DDX11Q96FC9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
DDX11Q96FC9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.19■■■□□ 2.42
DDX11Q96FC9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
DDX11Q96FC9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.18■■■□□ 2.42
DDX11Q96FC9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
DDX11Q96FC9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
DDX11Q96FC9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
DDX11Q96FC9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
DDX11Q96FC9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
DDX11Q96FC9 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
DDX11Q96FC9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
DDX11Q96FC9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
DDX11Q96FC9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
DDX11Q96FC9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
DDX11Q96FC9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.15■■■□□ 2.42
DDX11Q96FC9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
DDX11Q96FC9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
DDX11Q96FC9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
DDX11Q96FC9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.14■■■□□ 2.42
DDX11Q96FC9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
DDX11Q96FC9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
DDX11Q96FC9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.41
DDX11Q96FC9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
DDX11Q96FC9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
DDX11Q96FC9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.13■■■□□ 2.41
DDX11Q96FC9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
DDX11Q96FC9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
DDX11Q96FC9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.12■■■□□ 2.41
DDX11Q96FC9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
DDX11Q96FC9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
DDX11Q96FC9 DUX4L13-201ENST00000554103 1267 ntBASIC30.12■■■□□ 2.41
DDX11Q96FC9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
DDX11Q96FC9 DUX4L15-201ENST00000611059 1267 ntBASIC30.12■■■□□ 2.41
DDX11Q96FC9 DUX4L23-201ENST00000615195 1269 ntBASIC30.12■■■□□ 2.41
DDX11Q96FC9 DUX4L24-201ENST00000617576 1269 ntBASIC30.12■■■□□ 2.41
DDX11Q96FC9 DUX4L22-201ENST00000618238 1269 ntBASIC30.12■■■□□ 2.41
DDX11Q96FC9 DUX4L20-201ENST00000619712 1269 ntBASIC30.12■■■□□ 2.41
DDX11Q96FC9 DUX4L21-201ENST00000622058 1269 ntBASIC30.12■■■□□ 2.41
DDX11Q96FC9 DUX4L10-201ENST00000622460 1267 ntBASIC30.12■■■□□ 2.41
DDX11Q96FC9 DUX4L25-201ENST00000624915 1269 ntBASIC30.12■■■□□ 2.41
DDX11Q96FC9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms