Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.44■■□□□ 1.5
SRFBP1Q8NEF9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SRFBP1Q8NEF9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SRFBP1Q8NEF9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.44■■□□□ 1.5
SRFBP1Q8NEF9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SRFBP1Q8NEF9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SRFBP1Q8NEF9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.44■■□□□ 1.5
SRFBP1Q8NEF9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SRFBP1Q8NEF9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.43■■□□□ 1.5
SRFBP1Q8NEF9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.43■■□□□ 1.5
SRFBP1Q8NEF9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.43■■□□□ 1.5
SRFBP1Q8NEF9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.43■■□□□ 1.5
SRFBP1Q8NEF9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SRFBP1Q8NEF9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SRFBP1Q8NEF9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SRFBP1Q8NEF9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.42■■□□□ 1.5
SRFBP1Q8NEF9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SRFBP1Q8NEF9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SRFBP1Q8NEF9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SRFBP1Q8NEF9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.42■■□□□ 1.5
SRFBP1Q8NEF9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
SRFBP1Q8NEF9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
SRFBP1Q8NEF9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
SRFBP1Q8NEF9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SRFBP1Q8NEF9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.4■■□□□ 1.5
SRFBP1Q8NEF9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.4■■□□□ 1.5
SRFBP1Q8NEF9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.4■■□□□ 1.5
SRFBP1Q8NEF9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.39■■□□□ 1.5
SRFBP1Q8NEF9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
SRFBP1Q8NEF9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.39■■□□□ 1.49
SRFBP1Q8NEF9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.39■■□□□ 1.49
SRFBP1Q8NEF9 WHAMMP2-203ENST00000563942 1603 ntBASIC24.39■■□□□ 1.49
SRFBP1Q8NEF9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.38■■□□□ 1.49
SRFBP1Q8NEF9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.38■■□□□ 1.49
SRFBP1Q8NEF9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SRFBP1Q8NEF9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SRFBP1Q8NEF9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SRFBP1Q8NEF9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SRFBP1Q8NEF9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SRFBP1Q8NEF9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.37■■□□□ 1.49
SRFBP1Q8NEF9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SRFBP1Q8NEF9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
SRFBP1Q8NEF9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SRFBP1Q8NEF9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.37■■□□□ 1.49
SRFBP1Q8NEF9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.37■■□□□ 1.49
SRFBP1Q8NEF9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SRFBP1Q8NEF9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SRFBP1Q8NEF9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SRFBP1Q8NEF9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.36■■□□□ 1.49
SRFBP1Q8NEF9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SRFBP1Q8NEF9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SRFBP1Q8NEF9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
SRFBP1Q8NEF9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
SRFBP1Q8NEF9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.35■■□□□ 1.49
SRFBP1Q8NEF9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.35■■□□□ 1.49
SRFBP1Q8NEF9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SRFBP1Q8NEF9 AC100797.4-201ENST00000631653 1827 ntBASIC24.34■■□□□ 1.49
SRFBP1Q8NEF9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SRFBP1Q8NEF9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SRFBP1Q8NEF9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SRFBP1Q8NEF9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.33■■□□□ 1.48
SRFBP1Q8NEF9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SRFBP1Q8NEF9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SRFBP1Q8NEF9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SRFBP1Q8NEF9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SRFBP1Q8NEF9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SRFBP1Q8NEF9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SRFBP1Q8NEF9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.31■■□□□ 1.48
SRFBP1Q8NEF9 DRD5P2-201ENST00000421395 2012 ntBASIC24.3■■□□□ 1.48
SRFBP1Q8NEF9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.3■■□□□ 1.48
SRFBP1Q8NEF9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SRFBP1Q8NEF9 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SRFBP1Q8NEF9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SRFBP1Q8NEF9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.29■■□□□ 1.48
SRFBP1Q8NEF9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SRFBP1Q8NEF9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SRFBP1Q8NEF9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SRFBP1Q8NEF9 LINC01971-201ENST00000617888 1048 ntBASIC24.28■■□□□ 1.48
SRFBP1Q8NEF9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SRFBP1Q8NEF9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SRFBP1Q8NEF9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SRFBP1Q8NEF9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SRFBP1Q8NEF9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SRFBP1Q8NEF9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
SRFBP1Q8NEF9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.27■■□□□ 1.48
SRFBP1Q8NEF9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
SRFBP1Q8NEF9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
SRFBP1Q8NEF9 AC142086.6-201ENST00000621154 1765 ntBASIC24.26■■□□□ 1.47
SRFBP1Q8NEF9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SRFBP1Q8NEF9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SRFBP1Q8NEF9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.25■■□□□ 1.47
SRFBP1Q8NEF9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.25■■□□□ 1.47
SRFBP1Q8NEF9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SRFBP1Q8NEF9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
SRFBP1Q8NEF9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SRFBP1Q8NEF9 ZNRF2P2-203ENST00000454624 420 ntBASIC24.24■■□□□ 1.47
SRFBP1Q8NEF9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.24■■□□□ 1.47
SRFBP1Q8NEF9 ABHD17AP4-201ENST00000411545 909 ntBASIC24.23■■□□□ 1.47
SRFBP1Q8NEF9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SRFBP1Q8NEF9 AP002414.2-202ENST00000590929 1450 ntBASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms