Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AL592295.1-201ENST00000400984 884 ntBASIC16.15■□□□□ 0.18
VPS13BQ7Z7G8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.14■□□□□ 0.17
VPS13BQ7Z7G8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
VPS13BQ7Z7G8 AL451085.2-201ENST00000605085 799 ntBASIC16.14■□□□□ 0.17
VPS13BQ7Z7G8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
VPS13BQ7Z7G8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS13BQ7Z7G8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.14■□□□□ 0.17
VPS13BQ7Z7G8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
VPS13BQ7Z7G8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
VPS13BQ7Z7G8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS13BQ7Z7G8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS13BQ7Z7G8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS13BQ7Z7G8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13BQ7Z7G8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.12■□□□□ 0.17
VPS13BQ7Z7G8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS13BQ7Z7G8 AC004987.1-201ENST00000428627 508 ntBASIC16.12■□□□□ 0.17
VPS13BQ7Z7G8 U85056.1-201ENST00000616429 682 ntBASIC16.12■□□□□ 0.17
VPS13BQ7Z7G8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS13BQ7Z7G8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS13BQ7Z7G8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13BQ7Z7G8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS13BQ7Z7G8 AC060814.1-201ENST00000554326 538 ntBASIC16.11■□□□□ 0.17
VPS13BQ7Z7G8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS13BQ7Z7G8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
VPS13BQ7Z7G8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.1■□□□□ 0.17
VPS13BQ7Z7G8 AL035685.1-201ENST00000636663 812 ntBASIC16.1■□□□□ 0.17
VPS13BQ7Z7G8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.1■□□□□ 0.17
VPS13BQ7Z7G8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC16.09■□□□□ 0.17
VPS13BQ7Z7G8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13BQ7Z7G8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13BQ7Z7G8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13BQ7Z7G8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VPS13BQ7Z7G8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VPS13BQ7Z7G8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
VPS13BQ7Z7G8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS13BQ7Z7G8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VPS13BQ7Z7G8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS13BQ7Z7G8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VPS13BQ7Z7G8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.08■□□□□ 0.16
VPS13BQ7Z7G8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.08■□□□□ 0.16
VPS13BQ7Z7G8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VPS13BQ7Z7G8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS13BQ7Z7G8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC16.07■□□□□ 0.16
VPS13BQ7Z7G8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VPS13BQ7Z7G8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.06■□□□□ 0.16
VPS13BQ7Z7G8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.06■□□□□ 0.16
VPS13BQ7Z7G8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VPS13BQ7Z7G8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS13BQ7Z7G8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VPS13BQ7Z7G8 KRT18P60-201ENST00000312876 1297 ntBASIC16.05■□□□□ 0.16
VPS13BQ7Z7G8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.05■□□□□ 0.16
VPS13BQ7Z7G8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VPS13BQ7Z7G8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VPS13BQ7Z7G8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13BQ7Z7G8 ATP5G2P3-201ENST00000429083 425 ntBASIC16.04■□□□□ 0.16
VPS13BQ7Z7G8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13BQ7Z7G8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13BQ7Z7G8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13BQ7Z7G8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13BQ7Z7G8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13BQ7Z7G8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS13BQ7Z7G8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
VPS13BQ7Z7G8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS13BQ7Z7G8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS13BQ7Z7G8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13BQ7Z7G8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS13BQ7Z7G8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS13BQ7Z7G8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13BQ7Z7G8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13BQ7Z7G8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
VPS13BQ7Z7G8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13BQ7Z7G8 AC092296.2-201ENST00000589470 999 ntBASIC16.02■□□□□ 0.15
VPS13BQ7Z7G8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS13BQ7Z7G8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS13BQ7Z7G8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VPS13BQ7Z7G8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS13BQ7Z7G8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16■□□□□ 0.15
VPS13BQ7Z7G8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
VPS13BQ7Z7G8 AC010864.1-201ENST00000609407 1511 ntBASIC16■□□□□ 0.15
VPS13BQ7Z7G8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS13BQ7Z7G8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS13BQ7Z7G8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16■□□□□ 0.15
VPS13BQ7Z7G8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
VPS13BQ7Z7G8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC16■□□□□ 0.15
VPS13BQ7Z7G8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VPS13BQ7Z7G8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS13BQ7Z7G8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS13BQ7Z7G8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.99■□□□□ 0.15
VPS13BQ7Z7G8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS13BQ7Z7G8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VPS13BQ7Z7G8 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
VPS13BQ7Z7G8 AC019069.1-201ENST00000610008 1333 ntBASIC15.98■□□□□ 0.15
VPS13BQ7Z7G8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC15.98■□□□□ 0.15
VPS13BQ7Z7G8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
VPS13BQ7Z7G8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC15.97■□□□□ 0.15
VPS13BQ7Z7G8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VPS13BQ7Z7G8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.97■□□□□ 0.15
VPS13BQ7Z7G8 WHAMMP2-203ENST00000563942 1603 ntBASIC15.97■□□□□ 0.15
VPS13BQ7Z7G8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
VPS13BQ7Z7G8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms