Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.3■■□□□ 1.16
TBC1D28Q2M2D7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D28Q2M2D7 WHAMMP2-203ENST00000563942 1603 ntBASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 LINC01971-201ENST00000617888 1048 ntBASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 AC139426.1-201ENST00000568218 2529 ntBASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D28Q2M2D7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D28Q2M2D7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.26■■□□□ 1.15
TBC1D28Q2M2D7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TBC1D28Q2M2D7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.26■■□□□ 1.15
TBC1D28Q2M2D7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.26■■□□□ 1.15
TBC1D28Q2M2D7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D28Q2M2D7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.25■■□□□ 1.15
TBC1D28Q2M2D7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.25■■□□□ 1.15
TBC1D28Q2M2D7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
TBC1D28Q2M2D7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D28Q2M2D7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.24■■□□□ 1.15
TBC1D28Q2M2D7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.24■■□□□ 1.15
TBC1D28Q2M2D7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D28Q2M2D7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D28Q2M2D7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D28Q2M2D7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.23■■□□□ 1.15
TBC1D28Q2M2D7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D28Q2M2D7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.23■■□□□ 1.15
TBC1D28Q2M2D7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TBC1D28Q2M2D7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D28Q2M2D7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.21■■□□□ 1.15
TBC1D28Q2M2D7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D28Q2M2D7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TBC1D28Q2M2D7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TBC1D28Q2M2D7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TBC1D28Q2M2D7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TBC1D28Q2M2D7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.19■■□□□ 1.14
TBC1D28Q2M2D7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TBC1D28Q2M2D7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
TBC1D28Q2M2D7 DUX4L11-201ENST00000611504 1267 ntBASIC22.18■■□□□ 1.14
TBC1D28Q2M2D7 DUX4L12-201ENST00000614593 1267 ntBASIC22.18■■□□□ 1.14
TBC1D28Q2M2D7 DUX4L14-201ENST00000621227 1267 ntBASIC22.18■■□□□ 1.14
TBC1D28Q2M2D7 AC100797.4-201ENST00000631653 1827 ntBASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 MIR7108-201ENST00000614319 87 ntBASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.17■■□□□ 1.14
TBC1D28Q2M2D7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
TBC1D28Q2M2D7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TBC1D28Q2M2D7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TBC1D28Q2M2D7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TBC1D28Q2M2D7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D28Q2M2D7 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.14■■□□□ 1.13
TBC1D28Q2M2D7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TBC1D28Q2M2D7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.14■■□□□ 1.13
TBC1D28Q2M2D7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L13-201ENST00000554103 1267 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L15-201ENST00000611059 1267 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L23-201ENST00000615195 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L24-201ENST00000617576 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L22-201ENST00000618238 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L20-201ENST00000619712 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L21-201ENST00000622058 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L10-201ENST00000622460 1267 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 DUX4L25-201ENST00000624915 1269 ntBASIC22.13■■□□□ 1.13
TBC1D28Q2M2D7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.12■■□□□ 1.13
TBC1D28Q2M2D7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
TBC1D28Q2M2D7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TBC1D28Q2M2D7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.12■■□□□ 1.13
TBC1D28Q2M2D7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.12■■□□□ 1.13
TBC1D28Q2M2D7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms