Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 ITR1YDR497C 1755 nt6.78□□□□□ -1.32
HRD1Q08109 LEA1YPL213W 717 nt6.78□□□□□ -1.32
HRD1Q08109 VBA3YCL069W 1377 nt6.78□□□□□ -1.32
HRD1Q08109 HXT13YEL069C 1695 nt6.77□□□□□ -1.32
HRD1Q08109 STP3YLR375W 1032 nt6.77□□□□□ -1.33
HRD1Q08109 BUB2YMR055C 921 nt6.77□□□□□ -1.33
HRD1Q08109 MSB3YNL293W 1902 nt6.76□□□□□ -1.33
HRD1Q08109 IGD1YFR017C 588 nt6.76□□□□□ -1.33
HRD1Q08109 MOB1YIL106W 945 nt6.76□□□□□ -1.33
HRD1Q08109 ATP10YLR393W 840 nt6.76□□□□□ -1.33
HRD1Q08109 snR4snR4 186 nt6.76□□□□□ -1.33
HRD1Q08109 YNL040WYNL040W 1371 nt6.76□□□□□ -1.33
HRD1Q08109 YLR072WYLR072W 2082 nt6.75□□□□□ -1.33
HRD1Q08109 YLR460CYLR460C 1131 nt6.75□□□□□ -1.33
HRD1Q08109 ADH3YMR083W 1128 nt6.75□□□□□ -1.33
HRD1Q08109 HIS3YOR202W 663 nt6.75□□□□□ -1.33
HRD1Q08109 YJL045WYJL045W 1905 nt6.74□□□□□ -1.33
HRD1Q08109 PFS2YNL317W 1398 nt6.74□□□□□ -1.33
HRD1Q08109 PHB2YGR231C 933 nt6.73□□□□□ -1.33
HRD1Q08109 tS(GCU)LtS(GCU)L 80 nt6.73□□□□□ -1.33
HRD1Q08109 FTH1YBR207W 1398 nt6.72□□□□□ -1.33
HRD1Q08109 YBR056WYBR056W 1506 nt6.72□□□□□ -1.33
HRD1Q08109 CHA1YCL064C 1083 nt6.72□□□□□ -1.33
HRD1Q08109 YFR020WYFR020W 699 nt6.72□□□□□ -1.33
HRD1Q08109 CDC13YDL220C 2775 nt6.72□□□□□ -1.33
HRD1Q08109 NDE2YDL085W 1638 nt6.72□□□□□ -1.33
HRD1Q08109 ADH6YMR318C 1083 nt6.71□□□□□ -1.34
HRD1Q08109 MEP1YGR121C 1479 nt6.71□□□□□ -1.34
HRD1Q08109 CDD1YLR245C 429 nt6.7□□□□□ -1.34
HRD1Q08109 OLA1YBR025C 1185 nt6.7□□□□□ -1.34
HRD1Q08109 PGC1YPL206C 966 nt6.7□□□□□ -1.34
HRD1Q08109 DIA4YHR011W 1341 nt6.7□□□□□ -1.34
HRD1Q08109 BAP3YDR046C 1815 nt6.69□□□□□ -1.34
HRD1Q08109 CHS7YHR142W 951 nt6.69□□□□□ -1.34
HRD1Q08109 CYC3YAL039C 810 nt6.69□□□□□ -1.34
HRD1Q08109 YNL140CYNL140C 570 nt6.69□□□□□ -1.34
HRD1Q08109 TIF3YPR163C 1311 nt6.69□□□□□ -1.34
HRD1Q08109 CKI1YLR133W 1749 nt6.68□□□□□ -1.34
HRD1Q08109 ABP1YCR088W 1779 nt6.68□□□□□ -1.34
HRD1Q08109 RAD51YER095W 1203 nt6.68□□□□□ -1.34
HRD1Q08109 INO1YJL153C 1602 nt6.68□□□□□ -1.34
HRD1Q08109 PUS7YOR243C 2031 nt6.67□□□□□ -1.34
HRD1Q08109 FLX1YIL134W 936 nt6.67□□□□□ -1.34
HRD1Q08109 ATO2YNR002C 849 nt6.67□□□□□ -1.34
HRD1Q08109 HSV2YGR223C 1347 nt6.67□□□□□ -1.34
HRD1Q08109 MAS2YHR024C 1449 nt6.67□□□□□ -1.34
HRD1Q08109 PRC1YMR297W 1599 nt6.66□□□□□ -1.34
HRD1Q08109 HEL1YKR017C 1656 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)DtA(AGC)D 73 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)FtA(AGC)F 73 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)GtA(AGC)G 73 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)HtA(AGC)H 73 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)JtA(AGC)J 73 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)K1tA(AGC)K1 73 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)K2tA(AGC)K2 73 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)LtA(AGC)L 73 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)M1tA(AGC)M1 73 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)M2tA(AGC)M2 73 nt6.66□□□□□ -1.34
HRD1Q08109 tA(AGC)PtA(AGC)P 73 nt6.66□□□□□ -1.34
HRD1Q08109 YLR280CYLR280C 351 nt6.66□□□□□ -1.34
HRD1Q08109 IPL1YPL209C 1104 nt6.66□□□□□ -1.34
HRD1Q08109 BUD31YCR063W 474 nt6.65□□□□□ -1.34
HRD1Q08109 YGR137WYGR137W 375 nt6.65□□□□□ -1.34
HRD1Q08109 INM1YHR046C 888 nt6.65□□□□□ -1.34
HRD1Q08109 YBR232CYBR232C 360 nt6.65□□□□□ -1.34
HRD1Q08109 TGL5YOR081C 2250 nt6.64□□□□□ -1.35
HRD1Q08109 SLM3YDL033C 1254 nt6.64□□□□□ -1.35
HRD1Q08109 TDA4YJR116W 840 nt6.64□□□□□ -1.35
HRD1Q08109 SRP102YKL154W 735 nt6.64□□□□□ -1.35
HRD1Q08109 YCR061WYCR061W 1896 nt6.64□□□□□ -1.35
HRD1Q08109 GLY1YEL046C 1164 nt6.63□□□□□ -1.35
HRD1Q08109 YER152CYER152C 1332 nt6.63□□□□□ -1.35
HRD1Q08109 ERG6YML008C 1152 nt6.63□□□□□ -1.35
HRD1Q08109 MET22YOL064C 1074 nt6.62□□□□□ -1.35
HRD1Q08109 ERR3YMR323W 1314 nt6.61□□□□□ -1.35
HRD1Q08109 ERR1YOR393W 1314 nt6.61□□□□□ -1.35
HRD1Q08109 ERR2YPL281C 1314 nt6.61□□□□□ -1.35
HRD1Q08109 YCR025CYCR025C 411 nt6.61□□□□□ -1.35
HRD1Q08109 EHT1YBR177C 1356 nt6.6□□□□□ -1.35
HRD1Q08109 RCF1YML030W 480 nt6.6□□□□□ -1.35
HRD1Q08109 MDH2YOL126C 1134 nt6.6□□□□□ -1.35
HRD1Q08109 ERO1YML130C 1692 nt6.6□□□□□ -1.35
HRD1Q08109 SMC5YOL034W 3282 nt6.59□□□□□ -1.35
HRD1Q08109 WSC3YOL105C 1671 nt6.59□□□□□ -1.35
HRD1Q08109 SPE4YLR146C 903 nt6.59□□□□□ -1.35
HRD1Q08109 YMR253CYMR253C 1245 nt6.59□□□□□ -1.35
HRD1Q08109 FCP1YMR277W 2199 nt6.59□□□□□ -1.35
HRD1Q08109 MRP7YNL005C 1116 nt6.58□□□□□ -1.36
HRD1Q08109 MRN1YPL184C 1839 nt6.57□□□□□ -1.36
HRD1Q08109 RNA170RNA170 169 nt6.57□□□□□ -1.36
HRD1Q08109 PDC6YGR087C 1692 nt6.57□□□□□ -1.36
HRD1Q08109 OCH1YGL038C 1443 nt6.57□□□□□ -1.36
HRD1Q08109 LRO1YNR008W 1986 nt6.57□□□□□ -1.36
HRD1Q08109 KTR4YBR199W 1395 nt6.57□□□□□ -1.36
HRD1Q08109 RHO1YPR165W 630 nt6.56□□□□□ -1.36
HRD1Q08109 AQR1YNL065W 1761 nt6.55□□□□□ -1.36
HRD1Q08109 YPT31YER031C 672 nt6.55□□□□□ -1.36
HRD1Q08109 YMR166CYMR166C 1107 nt6.55□□□□□ -1.36
HRD1Q08109 THI73YLR004C 1572 nt6.54□□□□□ -1.36
HRD1Q08109 SER2YGR208W 930 nt6.54□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 31.3 ms