Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CLDN20P56880 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CLDN20P56880 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.4■■□□□ 1.34
CLDN20P56880 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.39■■□□□ 1.33
CLDN20P56880 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CLDN20P56880 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CLDN20P56880 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.37■■□□□ 1.33
CLDN20P56880 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLDN20P56880 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLDN20P56880 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.37■■□□□ 1.33
CLDN20P56880 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLDN20P56880 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CLDN20P56880 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLDN20P56880 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.36■■□□□ 1.33
CLDN20P56880 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.36■■□□□ 1.33
CLDN20P56880 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLDN20P56880 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLDN20P56880 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.34■■□□□ 1.33
CLDN20P56880 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.34■■□□□ 1.33
CLDN20P56880 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.34■■□□□ 1.33
CLDN20P56880 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.34■■□□□ 1.33
CLDN20P56880 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLDN20P56880 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.33■■□□□ 1.33
CLDN20P56880 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLDN20P56880 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.33■■□□□ 1.33
CLDN20P56880 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.33■■□□□ 1.32
CLDN20P56880 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLDN20P56880 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLDN20P56880 LINC00273-201ENST00000539813 1452 ntBASIC23.31■■□□□ 1.32
CLDN20P56880 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CLDN20P56880 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.3■■□□□ 1.32
CLDN20P56880 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CLDN20P56880 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLDN20P56880 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.3■■□□□ 1.32
CLDN20P56880 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CLDN20P56880 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.3■■□□□ 1.32
CLDN20P56880 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLDN20P56880 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CLDN20P56880 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLDN20P56880 LINC01971-201ENST00000617888 1048 ntBASIC23.29■■□□□ 1.32
CLDN20P56880 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.29■■□□□ 1.32
CLDN20P56880 AC135731.1-201ENST00000569415 2548 ntBASIC23.28■■□□□ 1.32
CLDN20P56880 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLDN20P56880 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.28■■□□□ 1.32
CLDN20P56880 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLDN20P56880 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CLDN20P56880 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLDN20P56880 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN20P56880 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN20P56880 AC142086.6-201ENST00000621154 1765 ntBASIC23.25■■□□□ 1.31
CLDN20P56880 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN20P56880 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CLDN20P56880 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CLDN20P56880 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLDN20P56880 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CLDN20P56880 DUX4L11-201ENST00000611504 1267 ntBASIC23.24■■□□□ 1.31
CLDN20P56880 DUX4L12-201ENST00000614593 1267 ntBASIC23.24■■□□□ 1.31
CLDN20P56880 DUX4L14-201ENST00000621227 1267 ntBASIC23.24■■□□□ 1.31
CLDN20P56880 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.24■■□□□ 1.31
CLDN20P56880 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN20P56880 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLDN20P56880 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CLDN20P56880 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN20P56880 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN20P56880 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.23■■□□□ 1.31
CLDN20P56880 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLDN20P56880 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.22■■□□□ 1.31
CLDN20P56880 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CLDN20P56880 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.22■■□□□ 1.31
CLDN20P56880 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.22■■□□□ 1.31
CLDN20P56880 AC135983.2-203ENST00000454486 1613 ntBASIC23.22■■□□□ 1.31
CLDN20P56880 WHAMMP2-203ENST00000563942 1603 ntBASIC23.21■■□□□ 1.31
CLDN20P56880 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.21■■□□□ 1.31
CLDN20P56880 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CLDN20P56880 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN20P56880 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN20P56880 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN20P56880 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.2■■□□□ 1.3
CLDN20P56880 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.19■■□□□ 1.3
CLDN20P56880 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN20P56880 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN20P56880 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN20P56880 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN20P56880 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN20P56880 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN20P56880 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
CLDN20P56880 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.17■■□□□ 1.3
CLDN20P56880 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN20P56880 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN20P56880 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CLDN20P56880 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN20P56880 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.16■■□□□ 1.3
CLDN20P56880 AL139393.2-201ENST00000608721 2025 ntBASIC23.16■■□□□ 1.3
CLDN20P56880 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN20P56880 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN20P56880 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.15■■□□□ 1.3
CLDN20P56880 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN20P56880 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLDN20P56880 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CLDN20P56880 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms