Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 SRM1YGL097W 1449 nt7.92□□□□□ -1.14
UPF3P48412 LPD1YFL018C 1500 nt7.92□□□□□ -1.14
UPF3P48412 SDS24YBR214W 1584 nt7.92□□□□□ -1.14
UPF3P48412 VBA3YCL069W 1377 nt7.91□□□□□ -1.14
UPF3P48412 RTG2YGL252C 1767 nt7.91□□□□□ -1.14
UPF3P48412 LYS20YDL182W 1287 nt7.9□□□□□ -1.14
UPF3P48412 FLX1YIL134W 936 nt7.9□□□□□ -1.14
UPF3P48412 YKR012CYKR012C 378 nt7.9□□□□□ -1.14
UPF3P48412 YJL045WYJL045W 1905 nt7.88□□□□□ -1.15
UPF3P48412 LEA1YPL213W 717 nt7.88□□□□□ -1.15
UPF3P48412 YIR035CYIR035C 765 nt7.87□□□□□ -1.15
UPF3P48412 RSM7YJR113C 744 nt7.86□□□□□ -1.15
UPF3P48412 ADE2YOR128C 1716 nt7.86□□□□□ -1.15
UPF3P48412 YBR056WYBR056W 1506 nt7.85□□□□□ -1.15
UPF3P48412 YJL009WYJL009W 327 nt7.85□□□□□ -1.15
UPF3P48412 BUB2YMR055C 921 nt7.83□□□□□ -1.16
UPF3P48412 GCD11YER025W 1584 nt7.83□□□□□ -1.16
UPF3P48412 FTH1YBR207W 1398 nt7.83□□□□□ -1.16
UPF3P48412 ENO1YGR254W 1314 nt7.82□□□□□ -1.16
UPF3P48412 YFR020WYFR020W 699 nt7.82□□□□□ -1.16
UPF3P48412 MOB1YIL106W 945 nt7.82□□□□□ -1.16
UPF3P48412 HIS3YOR202W 663 nt7.82□□□□□ -1.16
UPF3P48412 YJR149WYJR149W 1215 nt7.81□□□□□ -1.16
UPF3P48412 snR4snR4 186 nt7.81□□□□□ -1.16
UPF3P48412 ABP1YCR088W 1779 nt7.81□□□□□ -1.16
UPF3P48412 DIA4YHR011W 1341 nt7.8□□□□□ -1.16
UPF3P48412 UFD1YGR048W 1086 nt7.8□□□□□ -1.16
UPF3P48412 CYC3YAL039C 810 nt7.8□□□□□ -1.16
UPF3P48412 SRP102YKL154W 735 nt7.8□□□□□ -1.16
UPF3P48412 ADE5,7YGL234W 2409 nt7.79□□□□□ -1.16
UPF3P48412 YEL023CYEL023C 2049 nt7.79□□□□□ -1.16
UPF3P48412 YCR025CYCR025C 411 nt7.78□□□□□ -1.16
UPF3P48412 SWM1YDR260C 513 nt7.77□□□□□ -1.17
UPF3P48412 SLG1YOR008C 1137 nt7.77□□□□□ -1.17
UPF3P48412 ADE16YLR028C 1776 nt7.76□□□□□ -1.17
UPF3P48412 YKR023WYKR023W 1593 nt7.76□□□□□ -1.17
UPF3P48412 MEP1YGR121C 1479 nt7.76□□□□□ -1.17
UPF3P48412 SER2YGR208W 930 nt7.76□□□□□ -1.17
UPF3P48412 ECM10YEL030W 1935 nt7.74□□□□□ -1.17
UPF3P48412 YRF1-1YDR545W 5391 nt7.74□□□□□ -1.17
UPF3P48412 YRF1-5YLR467W 5391 nt7.74□□□□□ -1.17
UPF3P48412 YRF1-8YOR396W 5391 nt7.74□□□□□ -1.17
UPF3P48412 YLR460CYLR460C 1131 nt7.74□□□□□ -1.17
UPF3P48412 POP2YNR052C 1302 nt7.74□□□□□ -1.17
UPF3P48412 TIF3YPR163C 1311 nt7.74□□□□□ -1.17
UPF3P48412 DUS3YLR401C 2007 nt7.73□□□□□ -1.17
UPF3P48412 FIT1YDR534C 1587 nt7.73□□□□□ -1.17
UPF3P48412 ATG22YCL038C 1587 nt7.73□□□□□ -1.17
UPF3P48412 YCP4YCR004C 744 nt7.73□□□□□ -1.17
UPF3P48412 BUD31YCR063W 474 nt7.73□□□□□ -1.17
UPF3P48412 ERO1YML130C 1692 nt7.73□□□□□ -1.17
UPF3P48412 NDE2YDL085W 1638 nt7.72□□□□□ -1.17
UPF3P48412 GLY1YEL046C 1164 nt7.72□□□□□ -1.17
UPF3P48412 YLR280CYLR280C 351 nt7.72□□□□□ -1.17
UPF3P48412 HTS1YPR033C 1641 nt7.71□□□□□ -1.17
UPF3P48412 CHS7YHR142W 951 nt7.71□□□□□ -1.18
UPF3P48412 RNA170RNA170 169 nt7.71□□□□□ -1.18
UPF3P48412 YNL140CYNL140C 570 nt7.71□□□□□ -1.18
UPF3P48412 MAM3YOL060C 2121 nt7.7□□□□□ -1.18
UPF3P48412 INM1YHR046C 888 nt7.69□□□□□ -1.18
UPF3P48412 FAF1YIL019W 1041 nt7.69□□□□□ -1.18
UPF3P48412 TDA4YJR116W 840 nt7.69□□□□□ -1.18
UPF3P48412 MET22YOL064C 1074 nt7.69□□□□□ -1.18
UPF3P48412 TGL5YOR081C 2250 nt7.69□□□□□ -1.18
UPF3P48412 EHT1YBR177C 1356 nt7.69□□□□□ -1.18
UPF3P48412 SAM50YNL026W 1455 nt7.68□□□□□ -1.18
UPF3P48412 INO1YJL153C 1602 nt7.68□□□□□ -1.18
UPF3P48412 COG1YGL223C 1254 nt7.68□□□□□ -1.18
UPF3P48412 YGR210CYGR210C 1236 nt7.68□□□□□ -1.18
UPF3P48412 OLA1YBR025C 1185 nt7.68□□□□□ -1.18
UPF3P48412 DIP5YPL265W 1827 nt7.66□□□□□ -1.18
UPF3P48412 MET30YIL046W 1923 nt7.66□□□□□ -1.18
UPF3P48412 LRO1YNR008W 1986 nt7.66□□□□□ -1.18
UPF3P48412 YNL190WYNL190W 615 nt7.66□□□□□ -1.18
UPF3P48412 MRN1YPL184C 1839 nt7.66□□□□□ -1.18
UPF3P48412 PDC6YGR087C 1692 nt7.65□□□□□ -1.18
UPF3P48412 YPL108WYPL108W 507 nt7.65□□□□□ -1.18
UPF3P48412 SGV1YPR161C 1974 nt7.64□□□□□ -1.19
UPF3P48412 PFS2YNL317W 1398 nt7.64□□□□□ -1.19
UPF3P48412 RCF1YML030W 480 nt7.64□□□□□ -1.19
UPF3P48412 MDH2YOL126C 1134 nt7.64□□□□□ -1.19
UPF3P48412 YMR166CYMR166C 1107 nt7.63□□□□□ -1.19
UPF3P48412 IDP3YNL009W 1263 nt7.63□□□□□ -1.19
UPF3P48412 OCH1YGL038C 1443 nt7.62□□□□□ -1.19
UPF3P48412 WSC3YOL105C 1671 nt7.62□□□□□ -1.19
UPF3P48412 LAS17YOR181W 1902 nt7.61□□□□□ -1.19
UPF3P48412 STF1YDL130W-A 261 nt7.61□□□□□ -1.19
UPF3P48412 WSC4YHL028W 1818 nt7.6□□□□□ -1.19
UPF3P48412 TGA1tA(UGC)A 73 nt7.6□□□□□ -1.19
UPF3P48412 tA(UGC)EtA(UGC)E 73 nt7.6□□□□□ -1.19
UPF3P48412 tA(UGC)GtA(UGC)G 73 nt7.6□□□□□ -1.19
UPF3P48412 tA(UGC)LtA(UGC)L 73 nt7.6□□□□□ -1.19
UPF3P48412 tA(UGC)OtA(UGC)O 73 nt7.6□□□□□ -1.19
UPF3P48412 YMR007WYMR007W 381 nt7.6□□□□□ -1.19
UPF3P48412 GUT1YHL032C 2130 nt7.6□□□□□ -1.19
UPF3P48412 PMA2YPL036W 2844 nt7.6□□□□□ -1.19
UPF3P48412 KTR4YBR199W 1395 nt7.59□□□□□ -1.19
UPF3P48412 CAK1YFL029C 1107 nt7.59□□□□□ -1.19
UPF3P48412 RPL2AYFR031C-A 765 nt7.59□□□□□ -1.19
UPF3P48412 YGR137WYGR137W 375 nt7.59□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 30.7 ms