Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 LSR1LSR1 1175 nt9.83□□□□□ -0.84
RPN11P43588 SNX3YOR357C 489 nt9.83□□□□□ -0.84
RPN11P43588 SPE3YPR069C 882 nt9.83□□□□□ -0.84
RPN11P43588 THI73YLR004C 1572 nt9.82□□□□□ -0.84
RPN11P43588 YLR184WYLR184W 348 nt9.81□□□□□ -0.84
RPN11P43588 PTH2YBL057C 627 nt9.81□□□□□ -0.84
RPN11P43588 YPQ1YOL092W 927 nt9.81□□□□□ -0.84
RPN11P43588 SHC1YER096W 1539 nt9.81□□□□□ -0.84
RPN11P43588 PLB3YOL011W 2061 nt9.8□□□□□ -0.84
RPN11P43588 AIM46YHR199C 933 nt9.8□□□□□ -0.84
RPN11P43588 CRN1YLR429W 1956 nt9.79□□□□□ -0.84
RPN11P43588 PUP3YER094C 618 nt9.78□□□□□ -0.84
RPN11P43588 LGE1YPL055C 999 nt9.78□□□□□ -0.84
RPN11P43588 TIM50YPL063W 1431 nt9.78□□□□□ -0.84
RPN11P43588 CYT2YKL087C 675 nt9.76□□□□□ -0.85
RPN11P43588 QRI5YLR204W 336 nt9.76□□□□□ -0.85
RPN11P43588 APT1YML022W 564 nt9.76□□□□□ -0.85
RPN11P43588 INA1YLR413W 2028 nt9.75□□□□□ -0.85
RPN11P43588 GID8YMR135C 1368 nt9.75□□□□□ -0.85
RPN11P43588 YIR035CYIR035C 765 nt9.74□□□□□ -0.85
RPN11P43588 MPH3YJR160C 1809 nt9.73□□□□□ -0.85
RPN11P43588 MBF1YOR298C-A 456 nt9.73□□□□□ -0.85
RPN11P43588 CST26YBR042C 1194 nt9.73□□□□□ -0.85
RPN11P43588 ADH6YMR318C 1083 nt9.72□□□□□ -0.85
RPN11P43588 PRE10YOR362C 867 nt9.72□□□□□ -0.85
RPN11P43588 CKI1YLR133W 1749 nt9.72□□□□□ -0.85
RPN11P43588 YMR316C-BYMR316C-B 309 nt9.71□□□□□ -0.86
RPN11P43588 YPL067CYPL067C 597 nt9.7□□□□□ -0.86
RPN11P43588 RPC82YPR190C 1965 nt9.7□□□□□ -0.86
RPN11P43588 YAT1YAR035W 2064 nt9.68□□□□□ -0.86
RPN11P43588 MRS6YOR370C 1812 nt9.68□□□□□ -0.86
RPN11P43588 MEP1YGR121C 1479 nt9.68□□□□□ -0.86
RPN11P43588 YKL133CYKL133C 1392 nt9.68□□□□□ -0.86
RPN11P43588 GGA2YHR108W 1758 nt9.68□□□□□ -0.86
RPN11P43588 UME6YDR207C 2511 nt9.67□□□□□ -0.86
RPN11P43588 ARO8YGL202W 1503 nt9.67□□□□□ -0.86
RPN11P43588 THI3YDL080C 1830 nt9.67□□□□□ -0.86
RPN11P43588 BIO3YNR058W 1443 nt9.66□□□□□ -0.86
RPN11P43588 RPD3YNL330C 1302 nt9.66□□□□□ -0.86
RPN11P43588 NMA2YGR010W 1188 nt9.65□□□□□ -0.86
RPN11P43588 SUN4YNL066W 1263 nt9.65□□□□□ -0.86
RPN11P43588 YLR030WYLR030W 792 nt9.64□□□□□ -0.87
RPN11P43588 MSI1YBR195C 1269 nt9.63□□□□□ -0.87
RPN11P43588 YJR142WYJR142W 1029 nt9.62□□□□□ -0.87
RPN11P43588 BUB2YMR055C 921 nt9.62□□□□□ -0.87
RPN11P43588 TRR2YHR106W 1029 nt9.61□□□□□ -0.87
RPN11P43588 MCH5YOR306C 1566 nt9.6□□□□□ -0.87
RPN11P43588 OPI7YDR360W 435 nt9.6□□□□□ -0.87
RPN11P43588 PRS4YBL068W 981 nt9.6□□□□□ -0.87
RPN11P43588 HXT8YJL214W 1710 nt9.59□□□□□ -0.87
RPN11P43588 ERV2YPR037C 591 nt9.59□□□□□ -0.87
RPN11P43588 YER152CYER152C 1332 nt9.58□□□□□ -0.88
RPN11P43588 TMS1YDR105C 1422 nt9.58□□□□□ -0.88
RPN11P43588 YPL136WYPL136W 369 nt9.58□□□□□ -0.88
RPN11P43588 NAR1YNL240C 1476 nt9.58□□□□□ -0.88
RPN11P43588 LDB7YBL006C 543 nt9.57□□□□□ -0.88
RPN11P43588 KES1YPL145C 1305 nt9.56□□□□□ -0.88
RPN11P43588 TIF3YPR163C 1311 nt9.56□□□□□ -0.88
RPN11P43588 KRR1YCL059C 951 nt9.56□□□□□ -0.88
RPN11P43588 AIM20YIL158W 615 nt9.56□□□□□ -0.88
RPN11P43588 CYS4YGR155W 1524 nt9.56□□□□□ -0.88
RPN11P43588 IMD1YAR073W 1212 nt9.55□□□□□ -0.88
RPN11P43588 YHR218WYHR218W 1812 nt9.54□□□□□ -0.88
RPN11P43588 ARO3YDR035W 1113 nt9.54□□□□□ -0.88
RPN11P43588 YGL081WYGL081W 963 nt9.54□□□□□ -0.88
RPN11P43588 AAC3YBR085W 924 nt9.54□□□□□ -0.88
RPN11P43588 CDC3YLR314C 1563 nt9.54□□□□□ -0.88
RPN11P43588 RPC31YNL151C 756 nt9.53□□□□□ -0.88
RPN11P43588 MUP1YGR055W 1725 nt9.53□□□□□ -0.88
RPN11P43588 ZAP1YJL056C 2643 nt9.51□□□□□ -0.89
RPN11P43588 STS1YIR011C 960 nt9.51□□□□□ -0.89
RPN11P43588 GPM1YKL152C 744 nt9.51□□□□□ -0.89
RPN11P43588 SML1YML058W 315 nt9.51□□□□□ -0.89
RPN11P43588 ERG10YPL028W 1197 nt9.51□□□□□ -0.89
RPN11P43588 DPL1YDR294C 1770 nt9.5□□□□□ -0.89
RPN11P43588 AGP3YFL055W 1677 nt9.49□□□□□ -0.89
RPN11P43588 SGA1YIL099W 1650 nt9.49□□□□□ -0.89
RPN11P43588 COQ8YGL119W 1506 nt9.49□□□□□ -0.89
RPN11P43588 YBR056WYBR056W 1506 nt9.49□□□□□ -0.89
RPN11P43588 ARG7YMR062C 1326 nt9.49□□□□□ -0.89
RPN11P43588 FCY22YER060W-A 1593 nt9.48□□□□□ -0.89
RPN11P43588 TES1YJR019C 1050 nt9.46□□□□□ -0.9
RPN11P43588 SCS22YBL091C-A 528 nt9.46□□□□□ -0.9
RPN11P43588 HRB1YNL004W 1365 nt9.46□□□□□ -0.9
RPN11P43588 EHT1YBR177C 1356 nt9.46□□□□□ -0.9
RPN11P43588 MDH1YKL085W 1005 nt9.44□□□□□ -0.9
RPN11P43588 CWP2YKL096W-A 279 nt9.44□□□□□ -0.9
RPN11P43588 YDR387CYDR387C 1668 nt9.44□□□□□ -0.9
RPN11P43588 LRO1YNR008W 1986 nt9.44□□□□□ -0.9
RPN11P43588 YJL009WYJL009W 327 nt9.43□□□□□ -0.9
RPN11P43588 PDA1YER178W 1263 nt9.42□□□□□ -0.9
RPN11P43588 YKL153WYKL153W 510 nt9.42□□□□□ -0.9
RPN11P43588 RRP43YCR035C 1185 nt9.41□□□□□ -0.9
RPN11P43588 snR30snR30 606 nt9.41□□□□□ -0.9
RPN11P43588 FYV1YDR024W 486 nt9.39□□□□□ -0.91
RPN11P43588 PSA1YDL055C 1086 nt9.38□□□□□ -0.91
RPN11P43588 DCR2YLR361C 1737 nt9.37□□□□□ -0.91
RPN11P43588 SSL2YIL143C 2532 nt9.37□□□□□ -0.91
RPN11P43588 GLY1YEL046C 1164 nt9.37□□□□□ -0.91
RPN11P43588 STE3YKL178C 1413 nt9.37□□□□□ -0.91
Retrieved 100 of 7,029 protein–RNA pairs in 57.7 ms