Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 OLA1YBR025C 1185 nt8.02□□□□□ -1.13
RPH1P39956 YJL160CYJL160C 864 nt8.01□□□□□ -1.13
RPH1P39956 EMC3YKL207W 762 nt8.01□□□□□ -1.13
RPH1P39956 YMC2YBR104W 990 nt8.01□□□□□ -1.13
RPH1P39956 MCM5YLR274W 2328 nt8□□□□□ -1.13
RPH1P39956 YMR210WYMR210W 1350 nt7.99□□□□□ -1.13
RPH1P39956 RRT14YIL127C 621 nt7.99□□□□□ -1.13
RPH1P39956 BUD20YLR074C 501 nt7.99□□□□□ -1.13
RPH1P39956 YNL190WYNL190W 615 nt7.99□□□□□ -1.13
RPH1P39956 CAK1YFL029C 1107 nt7.98□□□□□ -1.13
RPH1P39956 YBL095WYBL095W 813 nt7.98□□□□□ -1.13
RPH1P39956 MET22YOL064C 1074 nt7.98□□□□□ -1.13
RPH1P39956 NSG2YNL156C 900 nt7.97□□□□□ -1.13
RPH1P39956 LAS17YOR181W 1902 nt7.97□□□□□ -1.13
RPH1P39956 OCH1YGL038C 1443 nt7.96□□□□□ -1.13
RPH1P39956 GRH1YDR517W 1119 nt7.96□□□□□ -1.14
RPH1P39956 YIR035CYIR035C 765 nt7.96□□□□□ -1.14
RPH1P39956 snR4snR4 186 nt7.96□□□□□ -1.14
RPH1P39956 YJR149WYJR149W 1215 nt7.95□□□□□ -1.14
RPH1P39956 MRS4YKR052C 915 nt7.95□□□□□ -1.14
RPH1P39956 tE(CUC)DtE(CUC)D 72 nt7.94□□□□□ -1.14
RPH1P39956 tE(CUC)ItE(CUC)I 72 nt7.94□□□□□ -1.14
RPH1P39956 MFT1YML062C 1179 nt7.94□□□□□ -1.14
RPH1P39956 YJL009WYJL009W 327 nt7.93□□□□□ -1.14
RPH1P39956 THI6YPL214C 1623 nt7.92□□□□□ -1.14
RPH1P39956 PET18YCR020C 648 nt7.92□□□□□ -1.14
RPH1P39956 HRA1HRA1 564 nt7.92□□□□□ -1.14
RPH1P39956 TMS1YDR105C 1422 nt7.92□□□□□ -1.14
RPH1P39956 YPT31YER031C 672 nt7.91□□□□□ -1.14
RPH1P39956 ORT1YOR130C 879 nt7.91□□□□□ -1.14
RPH1P39956 PAU21YOR394W 495 nt7.91□□□□□ -1.14
RPH1P39956 PAU22YPL282C 495 nt7.91□□□□□ -1.14
RPH1P39956 AAC3YBR085W 924 nt7.91□□□□□ -1.14
RPH1P39956 YPR084WYPR084W 1371 nt7.91□□□□□ -1.14
RPH1P39956 NPP2YEL016C 1482 nt7.91□□□□□ -1.14
RPH1P39956 PDC6YGR087C 1692 nt7.9□□□□□ -1.14
RPH1P39956 MAS1YLR163C 1389 nt7.9□□□□□ -1.14
RPH1P39956 BUB2YMR055C 921 nt7.9□□□□□ -1.14
RPH1P39956 YOR343CYOR343C 327 nt7.9□□□□□ -1.14
RPH1P39956 ADE16YLR028C 1776 nt7.89□□□□□ -1.15
RPH1P39956 TRP2YER090W 1524 nt7.89□□□□□ -1.15
RPH1P39956 YMR206WYMR206W 942 nt7.89□□□□□ -1.15
RPH1P39956 MRP1YDR347W 966 nt7.88□□□□□ -1.15
RPH1P39956 AAT1YKL106W 1356 nt7.87□□□□□ -1.15
RPH1P39956 UTR5YEL035C 501 nt7.87□□□□□ -1.15
RPH1P39956 RNA170RNA170 169 nt7.87□□□□□ -1.15
RPH1P39956 PMA2YPL036W 2844 nt7.87□□□□□ -1.15
RPH1P39956 PFS2YNL317W 1398 nt7.86□□□□□ -1.15
RPH1P39956 RPS6AYPL090C 711 nt7.86□□□□□ -1.15
RPH1P39956 RHO1YPR165W 630 nt7.86□□□□□ -1.15
RPH1P39956 RPS6BYBR181C 711 nt7.86□□□□□ -1.15
RPH1P39956 GDH1YOR375C 1365 nt7.85□□□□□ -1.15
RPH1P39956 FRT1YOR324C 1809 nt7.85□□□□□ -1.15
RPH1P39956 YER156CYER156C 1017 nt7.85□□□□□ -1.15
RPH1P39956 AIM34YMR003W 597 nt7.85□□□□□ -1.15
RPH1P39956 BXI1YNL305C 894 nt7.85□□□□□ -1.15
RPH1P39956 THI73YLR004C 1572 nt7.84□□□□□ -1.15
RPH1P39956 YRF1-2YER190W 5046 nt7.84□□□□□ -1.15
RPH1P39956 HSV2YGR223C 1347 nt7.84□□□□□ -1.15
RPH1P39956 YAL016C-AYAL016C-A 315 nt7.84□□□□□ -1.15
RPH1P39956 HXT11YOL156W 1704 nt7.83□□□□□ -1.16
RPH1P39956 ADA2YDR448W 1305 nt7.83□□□□□ -1.16
RPH1P39956 ADE5,7YGL234W 2409 nt7.82□□□□□ -1.16
RPH1P39956 CHA1YCL064C 1083 nt7.82□□□□□ -1.16
RPH1P39956 SRM1YGL097W 1449 nt7.82□□□□□ -1.16
RPH1P39956 FTH1YBR207W 1398 nt7.81□□□□□ -1.16
RPH1P39956 MEP1YGR121C 1479 nt7.81□□□□□ -1.16
RPH1P39956 YLR173WYLR173W 1827 nt7.8□□□□□ -1.16
RPH1P39956 RTG2YGL252C 1767 nt7.8□□□□□ -1.16
RPH1P39956 RPL12BYDR418W 498 nt7.8□□□□□ -1.16
RPH1P39956 TAD2YJL035C 753 nt7.8□□□□□ -1.16
RPH1P39956 YBR056WYBR056W 1506 nt7.79□□□□□ -1.16
RPH1P39956 snR86snR86 1004 nt7.79□□□□□ -1.16
RPH1P39956 ECM10YEL030W 1935 nt7.79□□□□□ -1.16
RPH1P39956 YDR510C-AYDR510C-A 117 nt7.78□□□□□ -1.16
RPH1P39956 TDH1YJL052W 999 nt7.78□□□□□ -1.16
RPH1P39956 GCD11YER025W 1584 nt7.77□□□□□ -1.17
RPH1P39956 ELP4YPL101W 1371 nt7.77□□□□□ -1.17
RPH1P39956 PUP3YER094C 618 nt7.77□□□□□ -1.17
RPH1P39956 ATP2YJR121W 1536 nt7.77□□□□□ -1.17
RPH1P39956 CTF3YLR381W 2202 nt7.76□□□□□ -1.17
RPH1P39956 NDE1YMR145C 1683 nt7.76□□□□□ -1.17
RPH1P39956 GGC1YDL198C 903 nt7.76□□□□□ -1.17
RPH1P39956 tL(UAA)B1tL(UAA)B1 84 nt7.76□□□□□ -1.17
RPH1P39956 tL(UAA)B2tL(UAA)B2 84 nt7.76□□□□□ -1.17
RPH1P39956 tL(UAA)DtL(UAA)D 84 nt7.76□□□□□ -1.17
RPH1P39956 SUP51tL(UAA)J 84 nt7.76□□□□□ -1.17
RPH1P39956 tL(UAA)KtL(UAA)K 84 nt7.76□□□□□ -1.17
RPH1P39956 tL(UAA)LtL(UAA)L 84 nt7.76□□□□□ -1.17
RPH1P39956 tL(UAA)NtL(UAA)N 84 nt7.76□□□□□ -1.17
RPH1P39956 TOS1YBR162C 1368 nt7.75□□□□□ -1.17
RPH1P39956 ITR1YDR497C 1755 nt7.74□□□□□ -1.17
RPH1P39956 SHC1YER096W 1539 nt7.74□□□□□ -1.17
RPH1P39956 BEM1YBR200W 1656 nt7.74□□□□□ -1.17
RPH1P39956 TOP3YLR234W 1971 nt7.74□□□□□ -1.17
RPH1P39956 YIL168WYIL168W 384 nt7.74□□□□□ -1.17
RPH1P39956 PRE10YOR362C 867 nt7.74□□□□□ -1.17
RPH1P39956 PRC1YMR297W 1599 nt7.73□□□□□ -1.17
RPH1P39956 YHL030W-AYHL030W-A 462 nt7.73□□□□□ -1.17
RPH1P39956 PMU1YKL128C 888 nt7.73□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 50.6 ms