Protein–RNA interactions for Protein: P25359

RRP43, Exosome complex component RRP43, yeastyeast

Predicted RBP Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP43P25359 tA(AGC)K1tA(AGC)K1 73 nt8.67□□□□□ -1.02
RRP43P25359 tA(AGC)K2tA(AGC)K2 73 nt8.67□□□□□ -1.02
RRP43P25359 tA(AGC)LtA(AGC)L 73 nt8.67□□□□□ -1.02
RRP43P25359 tA(AGC)M1tA(AGC)M1 73 nt8.67□□□□□ -1.02
RRP43P25359 tA(AGC)M2tA(AGC)M2 73 nt8.67□□□□□ -1.02
RRP43P25359 tA(AGC)PtA(AGC)P 73 nt8.67□□□□□ -1.02
RRP43P25359 WSC4YHL028W 1818 nt8.67□□□□□ -1.02
RRP43P25359 MOB1YIL106W 945 nt8.67□□□□□ -1.02
RRP43P25359 PAU15YIR041W 375 nt8.67□□□□□ -1.02
RRP43P25359 INO1YJL153C 1602 nt8.67□□□□□ -1.02
RRP43P25359 PFS2YNL317W 1398 nt8.67□□□□□ -1.02
RRP43P25359 MDH2YOL126C 1134 nt8.66□□□□□ -1.02
RRP43P25359 MET22YOL064C 1074 nt8.65□□□□□ -1.02
RRP43P25359 MET13YGL125W 1803 nt8.64□□□□□ -1.03
RRP43P25359 YNL140CYNL140C 570 nt8.64□□□□□ -1.03
RRP43P25359 TGL5YOR081C 2250 nt8.64□□□□□ -1.03
RRP43P25359 HSV2YGR223C 1347 nt8.63□□□□□ -1.03
RRP43P25359 IPL1YPL209C 1104 nt8.63□□□□□ -1.03
RRP43P25359 PMT1YDL095W 2454 nt8.63□□□□□ -1.03
RRP43P25359 SRP102YKL154W 735 nt8.62□□□□□ -1.03
RRP43P25359 PDC6YGR087C 1692 nt8.62□□□□□ -1.03
RRP43P25359 YRF1-1YDR545W 5391 nt8.61□□□□□ -1.03
RRP43P25359 YRF1-5YLR467W 5391 nt8.61□□□□□ -1.03
RRP43P25359 YRF1-8YOR396W 5391 nt8.61□□□□□ -1.03
RRP43P25359 INM1YHR046C 888 nt8.61□□□□□ -1.03
RRP43P25359 TDA4YJR116W 840 nt8.61□□□□□ -1.03
RRP43P25359 ALG7YBR243C 1347 nt8.59□□□□□ -1.03
RRP43P25359 ARO3YDR035W 1113 nt8.59□□□□□ -1.03
RRP43P25359 YLR280CYLR280C 351 nt8.59□□□□□ -1.03
RRP43P25359 SLM3YDL033C 1254 nt8.57□□□□□ -1.04
RRP43P25359 RPL2AYFR031C-A 765 nt8.57□□□□□ -1.04
RRP43P25359 CHS7YHR142W 951 nt8.57□□□□□ -1.04
RRP43P25359 CYC3YAL039C 810 nt8.57□□□□□ -1.04
RRP43P25359 YLR460CYLR460C 1131 nt8.57□□□□□ -1.04
RRP43P25359 ERO1YML130C 1692 nt8.56□□□□□ -1.04
RRP43P25359 OCH1YGL038C 1443 nt8.55□□□□□ -1.04
RRP43P25359 SHC1YER096W 1539 nt8.55□□□□□ -1.04
RRP43P25359 RCF1YML030W 480 nt8.55□□□□□ -1.04
RRP43P25359 HXT8YJL214W 1710 nt8.54□□□□□ -1.04
RRP43P25359 TPO1YLL028W 1761 nt8.53□□□□□ -1.04
RRP43P25359 KTR4YBR199W 1395 nt8.53□□□□□ -1.04
RRP43P25359 LPD1YFL018C 1500 nt8.53□□□□□ -1.04
RRP43P25359 YDR306CYDR306C 1437 nt8.53□□□□□ -1.04
RRP43P25359 WSC3YOL105C 1671 nt8.53□□□□□ -1.04
RRP43P25359 tS(GCU)LtS(GCU)L 80 nt8.52□□□□□ -1.05
RRP43P25359 ELP6YMR312W 822 nt8.52□□□□□ -1.05
RRP43P25359 MRP7YNL005C 1116 nt8.52□□□□□ -1.05
RRP43P25359 PUP3YER094C 618 nt8.51□□□□□ -1.05
RRP43P25359 OLA1YBR025C 1185 nt8.51□□□□□ -1.05
RRP43P25359 SGF73YGL066W 1974 nt8.5□□□□□ -1.05
RRP43P25359 YEL034C-AYEL034C-A 603 nt8.5□□□□□ -1.05
RRP43P25359 CAK1YFL029C 1107 nt8.5□□□□□ -1.05
RRP43P25359 RHO1YPR165W 630 nt8.5□□□□□ -1.05
RRP43P25359 YMR166CYMR166C 1107 nt8.49□□□□□ -1.05
RRP43P25359 PDC5YLR134W 1692 nt8.49□□□□□ -1.05
RRP43P25359 SER2YGR208W 930 nt8.48□□□□□ -1.05
RRP43P25359 AIM34YMR003W 597 nt8.46□□□□□ -1.06
RRP43P25359 YGR210CYGR210C 1236 nt8.45□□□□□ -1.06
RRP43P25359 ITR1YDR497C 1755 nt8.45□□□□□ -1.06
RRP43P25359 YHL030W-AYHL030W-A 462 nt8.44□□□□□ -1.06
RRP43P25359 PRC1YMR297W 1599 nt8.44□□□□□ -1.06
RRP43P25359 PEX28YHR150W 1740 nt8.43□□□□□ -1.06
RRP43P25359 HXT9YJL219W 1704 nt8.43□□□□□ -1.06
RRP43P25359 YCR025CYCR025C 411 nt8.43□□□□□ -1.06
RRP43P25359 YPL108WYPL108W 507 nt8.43□□□□□ -1.06
RRP43P25359 FRA1YLL029W 2250 nt8.43□□□□□ -1.06
RRP43P25359 MTC6YHR151C 1581 nt8.43□□□□□ -1.06
RRP43P25359 THI73YLR004C 1572 nt8.43□□□□□ -1.06
RRP43P25359 YJL064WYJL064W 396 nt8.42□□□□□ -1.06
RRP43P25359 HTS1YPR033C 1641 nt8.42□□□□□ -1.06
RRP43P25359 LAS17YOR181W 1902 nt8.42□□□□□ -1.06
RRP43P25359 AVL9YLR114C 2295 nt8.42□□□□□ -1.06
RRP43P25359 GNP1YDR508C 1992 nt8.41□□□□□ -1.06
RRP43P25359 SNP1YIL061C 903 nt8.41□□□□□ -1.06
RRP43P25359 YNL190WYNL190W 615 nt8.41□□□□□ -1.06
RRP43P25359 RUP1YOR138C 2016 nt8.41□□□□□ -1.06
RRP43P25359 TGA1tA(UGC)A 73 nt8.4□□□□□ -1.06
RRP43P25359 tA(UGC)EtA(UGC)E 73 nt8.4□□□□□ -1.06
RRP43P25359 tA(UGC)GtA(UGC)G 73 nt8.4□□□□□ -1.06
RRP43P25359 tA(UGC)LtA(UGC)L 73 nt8.4□□□□□ -1.06
RRP43P25359 tA(UGC)OtA(UGC)O 73 nt8.4□□□□□ -1.06
RRP43P25359 YGR137WYGR137W 375 nt8.4□□□□□ -1.06
RRP43P25359 RRT14YIL127C 621 nt8.4□□□□□ -1.06
RRP43P25359 CDA1YLR307W 906 nt8.4□□□□□ -1.06
RRP43P25359 TIM50YPL063W 1431 nt8.39□□□□□ -1.07
RRP43P25359 CKB1YGL019W 837 nt8.39□□□□□ -1.07
RRP43P25359 SNA3YJL151C 402 nt8.39□□□□□ -1.07
RRP43P25359 LSP1YPL004C 1026 nt8.39□□□□□ -1.07
RRP43P25359 RSC9YML127W 1746 nt8.39□□□□□ -1.07
RRP43P25359 BEM1YBR200W 1656 nt8.37□□□□□ -1.07
RRP43P25359 MET30YIL046W 1923 nt8.37□□□□□ -1.07
RRP43P25359 PET18YCR020C 648 nt8.37□□□□□ -1.07
RRP43P25359 RRT6YGL146C 936 nt8.37□□□□□ -1.07
RRP43P25359 PAU19YMR325W 375 nt8.37□□□□□ -1.07
RRP43P25359 YPL264CYPL264C 1062 nt8.37□□□□□ -1.07
RRP43P25359 YER152CYER152C 1332 nt8.36□□□□□ -1.07
RRP43P25359 SWM1YDR260C 513 nt8.36□□□□□ -1.07
RRP43P25359 SEN2YLR105C 1134 nt8.36□□□□□ -1.07
RRP43P25359 ALR1YOL130W 2580 nt8.35□□□□□ -1.07
RRP43P25359 JHD1YER051W 1479 nt8.35□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 68.9 ms