Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 RPS6AYPL090C 711 nt8.76□□□□□ -1.01
SRD1P09007 RPS6BYBR181C 711 nt8.76□□□□□ -1.01
SRD1P09007 YJL009WYJL009W 327 nt8.75□□□□□ -1.01
SRD1P09007 BXI1YNL305C 894 nt8.75□□□□□ -1.01
SRD1P09007 YPR084WYPR084W 1371 nt8.74□□□□□ -1.01
SRD1P09007 TPN1YGL186C 1740 nt8.74□□□□□ -1.01
SRD1P09007 GDH1YOR375C 1365 nt8.73□□□□□ -1.01
SRD1P09007 YPT31YER031C 672 nt8.73□□□□□ -1.01
SRD1P09007 YAL016C-AYAL016C-A 315 nt8.73□□□□□ -1.01
SRD1P09007 RHO1YPR165W 630 nt8.73□□□□□ -1.01
SRD1P09007 NPP1YCR026C 2229 nt8.73□□□□□ -1.01
SRD1P09007 AAT1YKL106W 1356 nt8.73□□□□□ -1.01
SRD1P09007 DTR1YBR180W 1719 nt8.72□□□□□ -1.01
SRD1P09007 RPL12BYDR418W 498 nt8.72□□□□□ -1.01
SRD1P09007 YBR056WYBR056W 1506 nt8.71□□□□□ -1.01
SRD1P09007 YMR206WYMR206W 942 nt8.71□□□□□ -1.02
SRD1P09007 ARO7YPR060C 771 nt8.71□□□□□ -1.02
SRD1P09007 ILV2YMR108W 2064 nt8.7□□□□□ -1.02
SRD1P09007 TAD2YJL035C 753 nt8.7□□□□□ -1.02
SRD1P09007 ELP4YPL101W 1371 nt8.7□□□□□ -1.02
SRD1P09007 tL(UAA)B1tL(UAA)B1 84 nt8.69□□□□□ -1.02
SRD1P09007 tL(UAA)B2tL(UAA)B2 84 nt8.69□□□□□ -1.02
SRD1P09007 tL(UAA)DtL(UAA)D 84 nt8.69□□□□□ -1.02
SRD1P09007 SUP51tL(UAA)J 84 nt8.69□□□□□ -1.02
SRD1P09007 tL(UAA)KtL(UAA)K 84 nt8.69□□□□□ -1.02
SRD1P09007 tL(UAA)LtL(UAA)L 84 nt8.69□□□□□ -1.02
SRD1P09007 tL(UAA)NtL(UAA)N 84 nt8.69□□□□□ -1.02
SRD1P09007 THI73YLR004C 1572 nt8.69□□□□□ -1.02
SRD1P09007 snR86snR86 1004 nt8.67□□□□□ -1.02
SRD1P09007 MTO1YGL236C 2010 nt8.67□□□□□ -1.02
SRD1P09007 MEP1YGR121C 1479 nt8.67□□□□□ -1.02
SRD1P09007 ATP2YJR121W 1536 nt8.67□□□□□ -1.02
SRD1P09007 HEM14YER014W 1620 nt8.66□□□□□ -1.02
SRD1P09007 SHC1YER096W 1539 nt8.66□□□□□ -1.02
SRD1P09007 PUP3YER094C 618 nt8.66□□□□□ -1.02
SRD1P09007 HEL2YDR266C 1920 nt8.64□□□□□ -1.03
SRD1P09007 URH1YDR400W 1023 nt8.64□□□□□ -1.03
SRD1P09007 TDH1YJL052W 999 nt8.64□□□□□ -1.03
SRD1P09007 FTH1YBR207W 1398 nt8.62□□□□□ -1.03
SRD1P09007 SFP1YLR403W 2052 nt8.61□□□□□ -1.03
SRD1P09007 YIL168WYIL168W 384 nt8.61□□□□□ -1.03
SRD1P09007 ADE1YAR015W 921 nt8.61□□□□□ -1.03
SRD1P09007 TOS1YBR162C 1368 nt8.61□□□□□ -1.03
SRD1P09007 FAF1YIL019W 1041 nt8.6□□□□□ -1.03
SRD1P09007 EHT1YBR177C 1356 nt8.6□□□□□ -1.03
SRD1P09007 LCP5YER127W 1074 nt8.59□□□□□ -1.03
SRD1P09007 KAE1YKR038C 1161 nt8.59□□□□□ -1.03
SRD1P09007 TRP2YER090W 1524 nt8.59□□□□□ -1.03
SRD1P09007 THI6YPL214C 1623 nt8.58□□□□□ -1.04
SRD1P09007 TIM50YPL063W 1431 nt8.58□□□□□ -1.04
SRD1P09007 LRO1YNR008W 1986 nt8.58□□□□□ -1.04
SRD1P09007 JHD1YER051W 1479 nt8.57□□□□□ -1.04
SRD1P09007 NUP53YMR153W 1428 nt8.57□□□□□ -1.04
SRD1P09007 YHL030W-AYHL030W-A 462 nt8.57□□□□□ -1.04
SRD1P09007 PMU1YKL128C 888 nt8.57□□□□□ -1.04
SRD1P09007 PRE10YOR362C 867 nt8.57□□□□□ -1.04
SRD1P09007 YTH1YPR107C 627 nt8.57□□□□□ -1.04
SRD1P09007 FET5YFL041W 1869 nt8.56□□□□□ -1.04
SRD1P09007 EDC2YER035W 438 nt8.56□□□□□ -1.04
SRD1P09007 HXT8YJL214W 1710 nt8.55□□□□□ -1.04
SRD1P09007 YJL043WYJL043W 774 nt8.55□□□□□ -1.04
SRD1P09007 MET2YNL277W 1461 nt8.55□□□□□ -1.04
SRD1P09007 YLR072WYLR072W 2082 nt8.54□□□□□ -1.04
SRD1P09007 RCF1YML030W 480 nt8.54□□□□□ -1.04
SRD1P09007 YOR268CYOR268C 399 nt8.54□□□□□ -1.04
SRD1P09007 NBA1YOL070C 1506 nt8.54□□□□□ -1.04
SRD1P09007 FUS3YBL016W 1062 nt8.53□□□□□ -1.04
SRD1P09007 MAE1YKL029C 2010 nt8.52□□□□□ -1.05
SRD1P09007 HXT11YOL156W 1704 nt8.51□□□□□ -1.05
SRD1P09007 BUD31YCR063W 474 nt8.51□□□□□ -1.05
SRD1P09007 INO1YJL153C 1602 nt8.51□□□□□ -1.05
SRD1P09007 HIS3YOR202W 663 nt8.5□□□□□ -1.05
SRD1P09007 YRF1-3YGR296W 5580 nt8.5□□□□□ -1.05
SRD1P09007 YRF1-6YNL339C 5580 nt8.5□□□□□ -1.05
SRD1P09007 YRF1-7YPL283C 5580 nt8.5□□□□□ -1.05
SRD1P09007 PET494YNR045W 1470 nt8.5□□□□□ -1.05
SRD1P09007 AI5_BETAQ0075 1065 nt8.49□□□□□ -1.05
SRD1P09007 NDE2YDL085W 1638 nt8.49□□□□□ -1.05
SRD1P09007 DIP5YPL265W 1827 nt8.49□□□□□ -1.05
SRD1P09007 PSP2YML017W 1782 nt8.48□□□□□ -1.05
SRD1P09007 TPO4YOR273C 1980 nt8.48□□□□□ -1.05
SRD1P09007 LEA1YPL213W 717 nt8.47□□□□□ -1.05
SRD1P09007 ABP1YCR088W 1779 nt8.46□□□□□ -1.05
SRD1P09007 GTB1YDR221W 2109 nt8.46□□□□□ -1.06
SRD1P09007 HAC1YFL031W 717 nt8.46□□□□□ -1.06
SRD1P09007 WSC3YOL105C 1671 nt8.46□□□□□ -1.06
SRD1P09007 GNP1YDR508C 1992 nt8.45□□□□□ -1.06
SRD1P09007 YGR137WYGR137W 375 nt8.45□□□□□ -1.06
SRD1P09007 PUS5YLR165C 765 nt8.45□□□□□ -1.06
SRD1P09007 SRM1YGL097W 1449 nt8.45□□□□□ -1.06
SRD1P09007 YDR476CYDR476C 675 nt8.44□□□□□ -1.06
SRD1P09007 RRT6YGL146C 936 nt8.44□□□□□ -1.06
SRD1P09007 TDA4YJR116W 840 nt8.44□□□□□ -1.06
SRD1P09007 APT1YML022W 564 nt8.44□□□□□ -1.06
SRD1P09007 ARG7YMR062C 1326 nt8.44□□□□□ -1.06
SRD1P09007 CBK1YNL161W 2271 nt8.42□□□□□ -1.06
SRD1P09007 GLY1YEL046C 1164 nt8.42□□□□□ -1.06
SRD1P09007 CPT1YNL130C 1182 nt8.42□□□□□ -1.06
SRD1P09007 SPR1YOR190W 1338 nt8.42□□□□□ -1.06
SRD1P09007 TGL5YOR081C 2250 nt8.42□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms