Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HCN1O60741 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
HCN1O60741 HLA-V-202ENST00000446817 847 ntBASIC23.77■■□□□ 1.4
HCN1O60741 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.77■■□□□ 1.4
HCN1O60741 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
HCN1O60741 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HCN1O60741 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
HCN1O60741 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HCN1O60741 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
HCN1O60741 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HCN1O60741 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
HCN1O60741 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
HCN1O60741 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.75■■□□□ 1.39
HCN1O60741 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.75■■□□□ 1.39
HCN1O60741 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.74■■□□□ 1.39
HCN1O60741 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.74■■□□□ 1.39
HCN1O60741 LINC01971-201ENST00000617888 1048 ntBASIC23.74■■□□□ 1.39
HCN1O60741 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HCN1O60741 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
HCN1O60741 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HCN1O60741 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HCN1O60741 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
HCN1O60741 AL139393.2-201ENST00000608721 2025 ntBASIC23.72■■□□□ 1.39
HCN1O60741 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
HCN1O60741 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.72■■□□□ 1.39
HCN1O60741 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.72■■□□□ 1.39
HCN1O60741 AC010864.1-201ENST00000609407 1511 ntBASIC23.71■■□□□ 1.39
HCN1O60741 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HCN1O60741 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HCN1O60741 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.7■■□□□ 1.38
HCN1O60741 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
HCN1O60741 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
HCN1O60741 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HCN1O60741 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HCN1O60741 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HCN1O60741 AC142086.6-201ENST00000621154 1765 ntBASIC23.68■■□□□ 1.38
HCN1O60741 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.68■■□□□ 1.38
HCN1O60741 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HCN1O60741 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HCN1O60741 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.67■■□□□ 1.38
HCN1O60741 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HCN1O60741 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.67■■□□□ 1.38
HCN1O60741 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HCN1O60741 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.66■■□□□ 1.38
HCN1O60741 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HCN1O60741 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.66■■□□□ 1.38
HCN1O60741 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
HCN1O60741 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.65■■□□□ 1.38
HCN1O60741 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.65■■□□□ 1.38
HCN1O60741 DUX4L11-201ENST00000611504 1267 ntBASIC23.65■■□□□ 1.38
HCN1O60741 DUX4L12-201ENST00000614593 1267 ntBASIC23.65■■□□□ 1.38
HCN1O60741 DUX4L14-201ENST00000621227 1267 ntBASIC23.65■■□□□ 1.38
HCN1O60741 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.64■■□□□ 1.37
HCN1O60741 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.64■■□□□ 1.37
HCN1O60741 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
HCN1O60741 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HCN1O60741 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HCN1O60741 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.63■■□□□ 1.37
HCN1O60741 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HCN1O60741 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
HCN1O60741 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HCN1O60741 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HCN1O60741 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HCN1O60741 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
HCN1O60741 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HCN1O60741 MIR3648-2-201ENST00000581792 180 ntBASIC23.61■■□□□ 1.37
HCN1O60741 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.61■■□□□ 1.37
HCN1O60741 MIR3648-1-201ENST00000615959 180 ntBASIC23.61■■□□□ 1.37
HCN1O60741 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
HCN1O60741 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.6■■□□□ 1.37
HCN1O60741 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.6■■□□□ 1.37
HCN1O60741 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HCN1O60741 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.59■■□□□ 1.37
HCN1O60741 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
HCN1O60741 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
HCN1O60741 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
HCN1O60741 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
HCN1O60741 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.59■■□□□ 1.37
HCN1O60741 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.59■■□□□ 1.37
HCN1O60741 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.59■■□□□ 1.37
HCN1O60741 MIR639-201ENST00000384974 98 ntBASIC23.58■■□□□ 1.37
HCN1O60741 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
HCN1O60741 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.58■■□□□ 1.36
HCN1O60741 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
HCN1O60741 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
HCN1O60741 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HCN1O60741 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
HCN1O60741 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
HCN1O60741 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.57■■□□□ 1.36
HCN1O60741 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HCN1O60741 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
HCN1O60741 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.55■■□□□ 1.36
HCN1O60741 AC016575.1-201ENST00000607026 382 ntBASIC23.55■■□□□ 1.36
HCN1O60741 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.55■■□□□ 1.36
HCN1O60741 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
HCN1O60741 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HCN1O60741 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HCN1O60741 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.53■■□□□ 1.36
HCN1O60741 CR559946.2-201ENST00000623684 991 ntBASIC23.53■■□□□ 1.36
HCN1O60741 DRD5P2-201ENST00000421395 2012 ntBASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms