Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCP4L1A6NKN8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCP4L1A6NKN8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.43■□□□□ 0.86
PCP4L1A6NKN8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCP4L1A6NKN8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCP4L1A6NKN8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCP4L1A6NKN8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCP4L1A6NKN8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.42■□□□□ 0.86
PCP4L1A6NKN8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.42■□□□□ 0.86
PCP4L1A6NKN8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCP4L1A6NKN8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCP4L1A6NKN8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.41■□□□□ 0.86
PCP4L1A6NKN8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCP4L1A6NKN8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCP4L1A6NKN8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.4■□□□□ 0.86
PCP4L1A6NKN8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCP4L1A6NKN8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCP4L1A6NKN8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.4■□□□□ 0.86
PCP4L1A6NKN8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PCP4L1A6NKN8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.4■□□□□ 0.86
PCP4L1A6NKN8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCP4L1A6NKN8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCP4L1A6NKN8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PCP4L1A6NKN8 LINC00543-201ENST00000567234 1845 ntBASIC20.39■□□□□ 0.86
PCP4L1A6NKN8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCP4L1A6NKN8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCP4L1A6NKN8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PCP4L1A6NKN8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCP4L1A6NKN8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCP4L1A6NKN8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCP4L1A6NKN8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.37■□□□□ 0.85
PCP4L1A6NKN8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCP4L1A6NKN8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCP4L1A6NKN8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCP4L1A6NKN8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PCP4L1A6NKN8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCP4L1A6NKN8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCP4L1A6NKN8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCP4L1A6NKN8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCP4L1A6NKN8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCP4L1A6NKN8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCP4L1A6NKN8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCP4L1A6NKN8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCP4L1A6NKN8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCP4L1A6NKN8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCP4L1A6NKN8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.35■□□□□ 0.85
PCP4L1A6NKN8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCP4L1A6NKN8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCP4L1A6NKN8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCP4L1A6NKN8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCP4L1A6NKN8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCP4L1A6NKN8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCP4L1A6NKN8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCP4L1A6NKN8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCP4L1A6NKN8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCP4L1A6NKN8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCP4L1A6NKN8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCP4L1A6NKN8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.33■□□□□ 0.84
PCP4L1A6NKN8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCP4L1A6NKN8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.32■□□□□ 0.84
PCP4L1A6NKN8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCP4L1A6NKN8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCP4L1A6NKN8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCP4L1A6NKN8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCP4L1A6NKN8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCP4L1A6NKN8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCP4L1A6NKN8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCP4L1A6NKN8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCP4L1A6NKN8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCP4L1A6NKN8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCP4L1A6NKN8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCP4L1A6NKN8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
PCP4L1A6NKN8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCP4L1A6NKN8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCP4L1A6NKN8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCP4L1A6NKN8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PCP4L1A6NKN8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCP4L1A6NKN8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCP4L1A6NKN8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.29■□□□□ 0.84
PCP4L1A6NKN8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCP4L1A6NKN8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCP4L1A6NKN8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCP4L1A6NKN8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCP4L1A6NKN8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCP4L1A6NKN8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCP4L1A6NKN8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCP4L1A6NKN8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCP4L1A6NKN8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCP4L1A6NKN8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCP4L1A6NKN8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCP4L1A6NKN8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCP4L1A6NKN8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.26■□□□□ 0.83
PCP4L1A6NKN8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCP4L1A6NKN8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCP4L1A6NKN8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCP4L1A6NKN8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PCP4L1A6NKN8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCP4L1A6NKN8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCP4L1A6NKN8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.25■□□□□ 0.83
PCP4L1A6NKN8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms