Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PARP4P2-201ENST00000446672 3326 ntBASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 AC003973.3-201ENST00000624863 2822 ntBASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 AC112198.2-201ENST00000426589 6996 ntBASIC5.24□□□□□ -1.57
PTCHD4Q6ZW05 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC002525.1-201ENST00000624392 1622 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 RN7SKP250-201ENST00000363924 321 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 RNU6-452P-201ENST00000384406 107 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 MIR130B-202ENST00000385018 82 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 U3.28-201ENST00000391249 210 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 GCNT1P4-201ENST00000404096 329 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 VTA1P1-201ENST00000414044 866 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC009784.1-201ENST00000426484 460 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 RPL23AP4-201ENST00000427757 463 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC092170.1-201ENST00000440211 356 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 LINC02210-201ENST00000444561 288 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC073476.1-201ENST00000452854 407 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 RNU7-140P-201ENST00000459546 60 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 RPL23AP44-201ENST00000482216 473 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 RNU6-1004P-201ENST00000516584 111 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 RN7SKP35-201ENST00000517210 151 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 OR11H3P-201ENST00000554547 982 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 SULT1C2P2-201ENST00000562517 294 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 CYP2C60P-201ENST00000566088 139 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 MTND4LP24-201ENST00000572277 291 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 ARGFXP2-201ENST00000579304 949 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC016877.3-201ENST00000606778 504 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC023813.4-201ENST00000607580 580 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 TUSC7.1-201ENST00000610969 165 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 MIR6813-201ENST00000621638 56 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AL136228.1-201ENST00000622221 319 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC111152.1-202ENST00000635848 339 ntBASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTCHD4Q6ZW05 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 MAPK10-328ENST00000641553 4009 ntBASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 RNU6-353P-201ENST00000364266 108 ntBASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 SNORA51.9-201ENST00000384295 124 ntBASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 SFR1P1-201ENST00000403720 688 ntBASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 ELOCP9-201ENST00000418624 239 ntBASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.22□□□□□ -1.57
PTCHD4Q6ZW05 RAC1P8-201ENST00000427086 527 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms