Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SNORA25.17-201ENST00000517184 124 ntBASIC7.58□□□□□ -1.2
HLA-CQ95604 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.58□□□□□ -1.2
HLA-CQ95604 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC7.58□□□□□ -1.2
HLA-CQ95604 AL117187.1-201ENST00000555482 181 ntBASIC7.58□□□□□ -1.2
HLA-CQ95604 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.58□□□□□ -1.2
HLA-CQ95604 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC7.58□□□□□ -1.2
HLA-CQ95604 FRG2DP-202ENST00000566967 323 ntBASIC7.58□□□□□ -1.2
HLA-CQ95604 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.58□□□□□ -1.2
HLA-CQ95604 AC087763.1-201ENST00000603391 286 ntBASIC7.58□□□□□ -1.2
HLA-CQ95604 AP001330.4-201ENST00000604350 154 ntBASIC7.58□□□□□ -1.2
HLA-CQ95604 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-CQ95604 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-CQ95604 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 MAPK10-316ENST00000641430 2285 ntBASIC7.58□□□□□ -1.2
HLA-CQ95604 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
HLA-CQ95604 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HLA-CQ95604 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.58□□□□□ -1.2
HLA-CQ95604 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-CQ95604 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.58□□□□□ -1.2
HLA-CQ95604 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.58□□□□□ -1.2
HLA-CQ95604 NF1P2-201ENST00000556855 2505 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.57□□□□□ -1.2
HLA-CQ95604 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 OR7E25P-202ENST00000641088 5937 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.57□□□□□ -1.2
HLA-CQ95604 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
HLA-CQ95604 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
HLA-CQ95604 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 RN7SKP189-201ENST00000365042 330 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.57□□□□□ -1.2
HLA-CQ95604 RNU6-730P-201ENST00000383954 104 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 RNU6-1151P-201ENST00000384684 107 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AL592114.1-201ENST00000403842 483 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC7.57□□□□□ -1.2
HLA-CQ95604 RN7SKP207-201ENST00000411204 303 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC7.57□□□□□ -1.2
HLA-CQ95604 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AC000089.1-201ENST00000424559 801 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.57□□□□□ -1.2
HLA-CQ95604 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.57□□□□□ -1.2
HLA-CQ95604 AL356276.2-201ENST00000435919 558 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AC005040.1-201ENST00000437783 482 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AL731563.1-201ENST00000442202 214 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 HMGN1P2-201ENST00000445197 310 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC7.57□□□□□ -1.2
HLA-CQ95604 PPP1R8P1-201ENST00000452549 1044 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 HMGB3P15-201ENST00000507326 574 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AC005741.1-201ENST00000511094 432 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC7.57□□□□□ -1.2
HLA-CQ95604 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.57□□□□□ -1.2
HLA-CQ95604 IGLC4-201ENST00000517690 248 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AC022634.1-201ENST00000520765 532 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.57□□□□□ -1.2
HLA-CQ95604 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.57□□□□□ -1.2
HLA-CQ95604 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.57□□□□□ -1.2
HLA-CQ95604 RN7SL667P-201ENST00000582817 298 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
HLA-CQ95604 AL157899.1-201ENST00000604110 936 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AC012368.3-201ENST00000604190 219 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 Z84480.1-201ENST00000605131 311 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 CTHRC1P1-201ENST00000605383 469 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 RN7SL261P-201ENST00000613441 282 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 RFPL4AP6-201ENST00000616792 846 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.57□□□□□ -1.2
HLA-CQ95604 AC005858.3-201ENST00000624756 589 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AP001052.1-201ENST00000626421 99 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.57□□□□□ -1.2
HLA-CQ95604 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
HLA-CQ95604 NUP58P1-201ENST00000502546 1738 ntBASIC7.57□□□□□ -1.2
HLA-CQ95604 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
HLA-CQ95604 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC7.57□□□□□ -1.2
HLA-CQ95604 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HLA-CQ95604 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
HLA-CQ95604 MTCO1P12-201ENST00000414273 1543 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms