Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPREP23469 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
PTPREP23469 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 MTCO1P25-201ENST00000414449 1799 ntBASIC8.43□□□□□ -1.06
PTPREP23469 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
PTPREP23469 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
PTPREP23469 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.43□□□□□ -1.06
PTPREP23469 BRAFP1-201ENST00000445336 2703 ntBASIC8.43□□□□□ -1.06
PTPREP23469 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.43□□□□□ -1.06
PTPREP23469 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC8.43□□□□□ -1.06
PTPREP23469 NACAP2-201ENST00000318548 624 ntBASIC8.43□□□□□ -1.06
PTPREP23469 RN7SKP174-201ENST00000363803 330 ntBASIC8.43□□□□□ -1.06
PTPREP23469 RPL24P7-201ENST00000399435 453 ntBASIC8.43□□□□□ -1.06
PTPREP23469 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.43□□□□□ -1.06
PTPREP23469 SNORA11.5-201ENST00000408163 128 ntBASIC8.43□□□□□ -1.06
PTPREP23469 MTND4LP17-201ENST00000414607 293 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AL953862.1-201ENST00000423016 168 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AC007559.1-201ENST00000428736 355 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AL356121.1-201ENST00000442911 156 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AL137792.2-201ENST00000443484 235 ntBASIC8.43□□□□□ -1.06
PTPREP23469 CYCSP44-201ENST00000448560 313 ntBASIC8.43□□□□□ -1.06
PTPREP23469 GOT2P2-201ENST00000450663 1251 ntBASIC8.43□□□□□ -1.06
PTPREP23469 RN7SL790P-201ENST00000474043 298 ntBASIC8.43□□□□□ -1.06
PTPREP23469 RN7SL518P-201ENST00000491887 280 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AC024558.1-201ENST00000505008 528 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AC025674.1-201ENST00000507074 324 ntBASIC8.43□□□□□ -1.06
PTPREP23469 HMGB1P28-201ENST00000507778 552 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AC024451.1-201ENST00000508013 779 ntBASIC8.43□□□□□ -1.06
PTPREP23469 PCBP2P3-201ENST00000509726 843 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AC093303.1-201ENST00000514549 295 ntBASIC8.43□□□□□ -1.06
PTPREP23469 SNORD60.2-201ENST00000516883 86 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.43□□□□□ -1.06
PTPREP23469 SAA3P-201ENST00000533267 365 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AC079075.1-201ENST00000559543 878 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AC009117.1-201ENST00000563948 554 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC8.43□□□□□ -1.06
PTPREP23469 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC8.43□□□□□ -1.06
PTPREP23469 AL157817.1-201ENST00000614264 790 ntBASIC8.43□□□□□ -1.06
PTPREP23469 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
PTPREP23469 MKKS-204ENST00000639674 192 ntBASIC8.43□□□□□ -1.06
PTPREP23469 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
PTPREP23469 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.43□□□□□ -1.06
PTPREP23469 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC8.43□□□□□ -1.06
PTPREP23469 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
PTPREP23469 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.43□□□□□ -1.06
PTPREP23469 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPREP23469 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.43□□□□□ -1.06
PTPREP23469 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.43□□□□□ -1.06
PTPREP23469 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
PTPREP23469 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.42□□□□□ -1.06
PTPREP23469 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.42□□□□□ -1.06
PTPREP23469 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.42□□□□□ -1.06
PTPREP23469 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
PTPREP23469 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.42□□□□□ -1.06
PTPREP23469 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 MIR16-1-201ENST00000385271 89 ntBASIC8.42□□□□□ -1.06
PTPREP23469 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PTPREP23469 AC099535.1-201ENST00000408928 371 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC005517.2-201ENST00000424673 553 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC008267.5-201ENST00000424928 265 ntBASIC8.42□□□□□ -1.06
PTPREP23469 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.42□□□□□ -1.06
PTPREP23469 FTH1P10-202ENST00000430907 550 ntBASIC8.42□□□□□ -1.06
PTPREP23469 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.42□□□□□ -1.06
PTPREP23469 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC8.42□□□□□ -1.06
PTPREP23469 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC8.42□□□□□ -1.06
PTPREP23469 AC010307.1-201ENST00000467206 836 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC068587.1-201ENST00000483613 781 ntBASIC8.42□□□□□ -1.06
PTPREP23469 RN7SL849P-201ENST00000485236 295 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC8.42□□□□□ -1.06
PTPREP23469 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC8.42□□□□□ -1.06
PTPREP23469 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTPREP23469 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.42□□□□□ -1.06
PTPREP23469 SCARNA18.2-201ENST00000516882 84 ntBASIC8.42□□□□□ -1.06
PTPREP23469 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC8.42□□□□□ -1.06
PTPREP23469 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms