Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 FKBP1AP1-201ENST00000594588 318 ntBASIC4.45□□□□□ -1.7
ELL3Q9HB65 AL023583.1-201ENST00000607518 1143 ntBASIC4.45□□□□□ -1.7
ELL3Q9HB65 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.45□□□□□ -1.7
ELL3Q9HB65 MIR6768-201ENST00000610734 72 ntBASIC4.45□□□□□ -1.7
ELL3Q9HB65 AC004241.3-201ENST00000611728 517 ntBASIC4.45□□□□□ -1.7
ELL3Q9HB65 AC105105.5-201ENST00000622635 1294 ntBASIC4.45□□□□□ -1.7
ELL3Q9HB65 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.45□□□□□ -1.7
ELL3Q9HB65 AP000648.2-201ENST00000624182 404 ntBASIC4.45□□□□□ -1.7
ELL3Q9HB65 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.45□□□□□ -1.7
ELL3Q9HB65 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.45□□□□□ -1.7
ELL3Q9HB65 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ELL3Q9HB65 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ELL3Q9HB65 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.45□□□□□ -1.7
ELL3Q9HB65 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.45□□□□□ -1.7
ELL3Q9HB65 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ELL3Q9HB65 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.45□□□□□ -1.7
ELL3Q9HB65 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
ELL3Q9HB65 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 RN7SKP162-201ENST00000363605 345 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 RNU1-146P-201ENST00000364015 165 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 MT-TP-201ENST00000387461 68 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 RNA5SP339-201ENST00000390987 122 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 RNA5SP105-201ENST00000391123 113 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 RPL10P10-201ENST00000403509 664 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 AL391361.1-201ENST00000405580 489 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 UBE2V1P15-201ENST00000407776 448 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC211486.3-201ENST00000412694 621 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC104333.2-201ENST00000422630 192 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 RPL34P6-201ENST00000432390 345 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 NPM1P29-201ENST00000483112 803 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 RN7SL346P-201ENST00000491561 294 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 ATP5LP3-201ENST00000514223 304 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 SNX6P1-201ENST00000601728 1224 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC037198.3-201ENST00000616754 526 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC118658.2-201ENST00000618697 459 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 AL356094.1-201ENST00000624663 1212 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 SAMMSON-209ENST00000641222 1100 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC006210.2-201ENST00000367074 1545 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 AC100778.3-201ENST00000580060 1750 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 SOCS5P3-201ENST00000425115 1576 ntBASIC4.44□□□□□ -1.7
ELL3Q9HB65 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
ELL3Q9HB65 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.44□□□□□ -1.7
ELL3Q9HB65 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
ELL3Q9HB65 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ELL3Q9HB65 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ELL3Q9HB65 AC092747.4-201ENST00000620519 1861 ntBASIC4.43□□□□□ -1.7
ELL3Q9HB65 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ELL3Q9HB65 AC097461.1-201ENST00000568928 2821 ntBASIC4.43□□□□□ -1.7
ELL3Q9HB65 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ELL3Q9HB65 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ELL3Q9HB65 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ELL3Q9HB65 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ELL3Q9HB65 MIR143-201ENST00000385300 106 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms