Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ARHGEF39-201ENST00000378387 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 EARS2-201ENST00000449606 3961 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 NPIPB4-208ENST00000537951 1342 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 SLA-202ENST00000395352 2102 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ACSL6-203ENST00000379240 2548 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 TTLL6-205ENST00000433608 2548 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 HIVEP1-209ENST00000627968 8924 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AP003393.1-201ENST00000532153 4476 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 PCDHGC4-201ENST00000306593 4623 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 PPIAP24-201ENST00000328558 471 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 Metazoa_SRP.1-201ENST00000360440 343 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 RNA5SP469-201ENST00000364165 109 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR92A2-201ENST00000385299 75 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 GAPDHP63-201ENST00000405405 1007 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 CHCHD2P4-201ENST00000418701 434 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AL355433.1-201ENST00000422804 300 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 LINC01517-201ENST00000426922 980 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 BANF1P2-201ENST00000430526 264 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 IMMP2L-203ENST00000437687 243 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF816-205ENST00000438970 491 ntTSL 4 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 PRDX2P4-201ENST00000447134 600 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC069285.1-201ENST00000450891 419 ntTSL 3 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 RN7SL299P-201ENST00000464573 280 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC105137.1-201ENST00000484355 562 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC009153.1-201ENST00000485799 496 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 MLLT10P2-201ENST00000506434 249 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC233724.7-201ENST00000511476 253 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 GLTPP1-201ENST00000528859 622 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 RAN-211ENST00000541679 572 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 SNRPCP18-201ENST00000560619 439 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC092120.2-201ENST00000567166 415 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR4418-201ENST00000581169 62 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC008507.4-201ENST00000585464 127 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 TCF4-AS1-201ENST00000587660 396 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC010463.3-201ENST00000594077 500 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AL772337.4-201ENST00000610707 745 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 GAGE13-201ENST00000612958 530 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 SNORD3D-201ENST00000619178 218 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC113385.3-201ENST00000621479 747 ntBASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 GAGE2E-201ENST00000621907 403 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 GH2-205ENST00000622506 702 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC244230.1-201ENST00000623463 498 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 KRTAP9-1-203ENST00000634358 330 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 IL7-211ENST00000639719 597 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 LINC01426-202ENST00000420877 2632 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AL512638.2-201ENST00000425449 2610 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AZI2-212ENST00000479665 4706 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 PASK-215ENST00000544142 4724 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 HPS4-202ENST00000398145 4497 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 DENND5A-210ENST00000530044 4060 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 GPATCH4-201ENST00000368232 1972 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 MEIS2-211ENST00000559085 2538 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF263-201ENST00000219069 3830 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 IFT122-215ENST00000507564 3824 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 GAD1-202ENST00000358196 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ARHGEF26-201ENST00000356448 5254 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 ZNF574-204ENST00000600245 3598 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 MTO1-205ENST00000415954 2837 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP3-3Q9BYR6 SFI1-204ENST00000400289 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 EXOC2-201ENST00000230449 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 SERPINA12-201ENST00000341228 2061 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 C9orf85-206ENST00000486911 3321 ntTSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 TNC-211ENST00000537320 4946 ntTSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 ABCF2P1-201ENST00000465687 1867 ntBASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 SH3GL2-201ENST00000380607 2565 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 FLRT2-204ENST00000554746 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 R3HDM2-202ENST00000358907 3974 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
KRTAP3-3Q9BYR6 FOXN1-201ENST00000226247 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms