RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 NISCHQ9Y2I1 1504 aa20.39■□□□□ 0.85
TNC-211ENST00000537320 DCAF8L2P0C7V8 631 aa20.31■□□□□ 0.84
TNC-211ENST00000537320 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
TNC-211ENST00000537320 SHROOM4Q9ULL8 1493 aa19.18■□□□□ 0.66
TNC-211ENST00000537320 EHMT2Q96KQ7 1210 aa18.46■□□□□ 0.55
TNC-211ENST00000537320 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
TNC-211ENST00000537320 APLP2Q06481 763 aa17.94■□□□□ 0.46
TNC-211ENST00000537320 TRIM41Q8WV44 630 aa17.89■□□□□ 0.45
TNC-211ENST00000537320 TTBK1Q5TCY1 1321 aaPredicted RBP17.79■□□□□ 0.44
TNC-211ENST00000537320 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
TNC-211ENST00000537320 RANGAP1P46060 587 aaPredicted RBP17.71■□□□□ 0.43
TNC-211ENST00000537320 UBTFP17480 764 aaKnown RBP17.57■□□□□ 0.4
TNC-211ENST00000537320 ABCC9O60706 1549 aa17.46■□□□□ 0.39
TNC-211ENST00000537320 ATP1B4Q9UN42 357 aaPredicted RBP17.46■□□□□ 0.39
TNC-211ENST00000537320 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
TNC-211ENST00000537320 CCER1Q8TC90 406 aaPredicted RBP17.35■□□□□ 0.37
TNC-211ENST00000537320 PELP1Q8IZL8 1130 aaKnown RBP17.34■□□□□ 0.37
TNC-211ENST00000537320 PPARGC1BQ86YN6 1023 aaKnown RBP17.3■□□□□ 0.36
TNC-211ENST00000537320 ZEB1P37275 1124 aaPredicted RBP17.28■□□□□ 0.36
TNC-211ENST00000537320 LOC105371045A0A1W2PR82 267 aa17.25■□□□□ 0.35
TNC-211ENST00000537320 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
TNC-211ENST00000537320 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
TNC-211ENST00000537320 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
TNC-211ENST00000537320 ITGAEP38570 1179 aa16.93■□□□□ 0.3
TNC-211ENST00000537320 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
TNC-211ENST00000537320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
TNC-211ENST00000537320 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
TNC-211ENST00000537320 HRCP23327 699 aa16.84■□□□□ 0.29
TNC-211ENST00000537320 CCDC180Q9P1Z9 1646 aa16.79■□□□□ 0.28
TNC-211ENST00000537320 SCRIBQ14160 1630 aa16.78■□□□□ 0.28
TNC-211ENST00000537320 YTHDC1Q96MU7 727 aaKnown RBP16.76■□□□□ 0.27
TNC-211ENST00000537320 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
TNC-211ENST00000537320 FAM50AQ14320 339 aaKnown RBP16.57■□□□□ 0.24
TNC-211ENST00000537320 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
TNC-211ENST00000537320 NEFLP07196 543 aa16.55■□□□□ 0.24
TNC-211ENST00000537320 POLR3GLQ9BT43 218 aa16.52■□□□□ 0.24
TNC-211ENST00000537320 FBLN2P98095 1184 aa16.48■□□□□ 0.23
TNC-211ENST00000537320 P3H3Q8IVL6 736 aa16.42■□□□□ 0.22
TNC-211ENST00000537320 MYT1Q01538 1121 aa16.41■□□□□ 0.22
TNC-211ENST00000537320 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
TNC-211ENST00000537320 TRIM52Q96A61 297 aa16.39■□□□□ 0.21
TNC-211ENST00000537320 RB1CC1Q8TDY2 1594 aa16.39■□□□□ 0.21
TNC-211ENST00000537320 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
TNC-211ENST00000537320 NEUROD1Q13562 356 aa16.34■□□□□ 0.21
TNC-211ENST00000537320 DIEXFQ68CQ4 756 aaKnown RBP16.34■□□□□ 0.21
TNC-211ENST00000537320 ARID3CA6NKF2 412 aa16.3■□□□□ 0.2
TNC-211ENST00000537320 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
TNC-211ENST00000537320 NACADO15069 1562 aa16.29■□□□□ 0.2
TNC-211ENST00000537320 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
TNC-211ENST00000537320 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
TNC-211ENST00000537320 DCAF1Q9Y4B6 1507 aa16.13■□□□□ 0.17
TNC-211ENST00000537320 ZNF777Q9ULD5 760 aaPredicted RBP16.12■□□□□ 0.17
TNC-211ENST00000537320 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
TNC-211ENST00000537320 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
TNC-211ENST00000537320 BAZ1BQ9UIG0 1483 aaKnown RBP16.05■□□□□ 0.16
TNC-211ENST00000537320 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
TNC-211ENST00000537320 CECR2Q9BXF3 1484 aa16.04■□□□□ 0.16
TNC-211ENST00000537320 ANP32CO43423 234 aa16■□□□□ 0.15
TNC-211ENST00000537320 WRNQ14191 1432 aaPredicted RBP eCLIP15.99■□□□□ 0.15
TNC-211ENST00000537320 BAZ1AQ9NRL2 1556 aaPredicted RBP15.99■□□□□ 0.15
TNC-211ENST00000537320 CLIP1P30622 1438 aa15.98■□□□□ 0.15
TNC-211ENST00000537320 EEA1Q15075 1411 aa15.94■□□□□ 0.14
TNC-211ENST00000537320 CHMP7Q8WUX9 453 aaPredicted RBP15.92■□□□□ 0.14
TNC-211ENST00000537320 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
TNC-211ENST00000537320 DAXXQ9UER7 740 aaPredicted RBP15.9■□□□□ 0.14
TNC-211ENST00000537320 CHIC2Q9UKJ5 165 aa15.89■□□□□ 0.13
TNC-211ENST00000537320 CEP162Q5TB80 1403 aa15.88■□□□□ 0.13
TNC-211ENST00000537320 MTUS2Q5JR59 1369 aa15.87■□□□□ 0.13
TNC-211ENST00000537320 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
TNC-211ENST00000537320 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.13
TNC-211ENST00000537320 KIF27Q86VH2 1401 aa15.83■□□□□ 0.13
TNC-211ENST00000537320 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.12
TNC-211ENST00000537320 MROH2BQ7Z745 1585 aa15.82■□□□□ 0.12
TNC-211ENST00000537320 BCANQ96GW7 911 aa15.8■□□□□ 0.12
TNC-211ENST00000537320 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
TNC-211ENST00000537320 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.12
TNC-211ENST00000537320 CLSPNQ9HAW4 1339 aa15.75■□□□□ 0.11
TNC-211ENST00000537320 TSPY4P0CV99 314 aa15.75■□□□□ 0.11
TNC-211ENST00000537320 TSPY10P0CW01 314 aa15.75■□□□□ 0.11
TNC-211ENST00000537320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.11
TNC-211ENST00000537320 CHGAP10645 457 aaKnown RBP15.73■□□□□ 0.11
TNC-211ENST00000537320 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.11
TNC-211ENST00000537320 DDX10Q13206 875 aaKnown RBP15.71■□□□□ 0.1
TNC-211ENST00000537320 SOGA1O94964 1423 aa15.7■□□□□ 0.1
TNC-211ENST00000537320 ESF1Q9H501 851 aaKnown RBP15.69■□□□□ 0.1
TNC-211ENST00000537320 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
TNC-211ENST00000537320 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
TNC-211ENST00000537320 PLEKHD1A6NEE1 506 aa15.65■□□□□ 0.1
TNC-211ENST00000537320 KCNH8Q96L42 1107 aa15.64■□□□□ 0.09
TNC-211ENST00000537320 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
TNC-211ENST00000537320 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
TNC-211ENST00000537320 CUX2O14529 1486 aa15.62■□□□□ 0.09
TNC-211ENST00000537320 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
TNC-211ENST00000537320 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
TNC-211ENST00000537320 KDM2AQ9Y2K7 1162 aa15.61■□□□□ 0.09
TNC-211ENST00000537320 CARMIL1Q5VZK9 1371 aa15.6■□□□□ 0.09
TNC-211ENST00000537320 WIZO95785 1651 aa15.59■□□□□ 0.09
TNC-211ENST00000537320 NEFMP07197 916 aa15.58■□□□□ 0.09
TNC-211ENST00000537320 HIRIP3Q9BW71 556 aaPredicted RBP15.58■□□□□ 0.08
TNC-211ENST00000537320 PLPPR3Q6T4P5 718 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms