Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 OR4F13P-202ENST00000560066 2054 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 AC095038.1-201ENST00000429248 1591 ntBASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
KRTAP4-3Q9BYR4 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 AL353763.2-201ENST00000623489 1903 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 AL669831.5-218ENST00000591702 1873 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 AC005294.1-201ENST00000355509 281 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 Y_RNA.5-201ENST00000362334 102 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 RNU6-212P-201ENST00000362642 104 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 RN7SKP174-201ENST00000363803 330 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 RNA5SP472-201ENST00000363868 119 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 Y_RNA.261-201ENST00000364631 102 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 SUGT1P1-201ENST00000379514 476 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 RNU6-723P-201ENST00000383973 107 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 RNU6-167P-201ENST00000384292 106 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 RNU6-658P-201ENST00000384606 106 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 AL583835.1-201ENST00000399570 407 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 YWHAZP6-201ENST00000399764 738 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 AL357075.1-201ENST00000404107 726 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 AL590143.1-201ENST00000405071 138 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 AL162578.1-201ENST00000406202 378 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 MRPL32P1-201ENST00000406301 247 ntBASIC2.48□□□□□ -2.01
KRTAP4-3Q9BYR4 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms