Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 AC209154.1-201ENST00000582156 337 ntBASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 AC087783.2-201ENST00000605070 562 ntBASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 AC007497.1-201ENST00000610421 561 ntBASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.46□□□□□ -1.7
RSPO3Q9BXY4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 SNORD96B-201ENST00000386148 79 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 AL078599.1-201ENST00000402075 293 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 AP000580.1-201ENST00000404439 358 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 RN7SKP213-201ENST00000410746 298 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 AC004938.1-201ENST00000438468 308 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 AL772161.1-201ENST00000439130 476 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 CEACAMP7-201ENST00000444105 496 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 OTX2P1-201ENST00000450956 354 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 AC022832.1-201ENST00000530718 645 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 ZNF652P1-201ENST00000442420 1309 ntBASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RSPO3Q9BXY4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 ZNF733P-202ENST00000444809 1573 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 BTBD10P1-201ENST00000549824 1352 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 RN7SKP95-201ENST00000362860 303 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 MIR585-201ENST00000384887 94 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 MIR550A3-201ENST00000390735 95 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC136624.1-201ENST00000400791 413 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 Y_RNA.625-201ENST00000411256 107 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 VN1R37P-201ENST00000419096 748 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 PSMD10P3-201ENST00000437000 448 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AL137845.2-201ENST00000444292 988 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 UBE2V2P4-201ENST00000447495 259 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 RN7SL319P-201ENST00000480656 221 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC147055.3-201ENST00000510547 851 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC108043.1-201ENST00000512696 574 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 RN7SKP260-201ENST00000516907 149 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 TVP23CP2-201ENST00000571473 623 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AL049539.1-201ENST00000611964 459 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC073575.2-201ENST00000614212 627 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC243960.7-201ENST00000623532 707 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC073342.3-201ENST00000624211 193 ntBASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RSPO3Q9BXY4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms