Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCUBE3Q8IX30 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCUBE3Q8IX30 DBF4P1-201ENST00000412976 1892 ntBASIC7.74□□□□□ -1.17
SCUBE3Q8IX30 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SCUBE3Q8IX30 AL590065.1-201ENST00000603371 4774 ntBASIC7.74□□□□□ -1.17
SCUBE3Q8IX30 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.74□□□□□ -1.17
SCUBE3Q8IX30 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.74□□□□□ -1.17
SCUBE3Q8IX30 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SCUBE3Q8IX30 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
SCUBE3Q8IX30 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 ELL2P4-201ENST00000446870 1376 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC073343.1-201ENST00000328239 651 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 RNA5SP218-201ENST00000363188 109 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 Y_RNA.149-201ENST00000363558 117 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC245036.1-201ENST00000391727 309 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AL034403.1-201ENST00000399414 885 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 GAPDHP42-201ENST00000406848 981 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 PPIAP30-201ENST00000415473 519 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 BOLA3P4-201ENST00000418151 400 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC013403.1-201ENST00000436954 263 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 BNIP3P2-201ENST00000441221 577 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 MEMO1P3-201ENST00000459811 302 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC017015.1-201ENST00000477387 286 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 RN7SL152P-201ENST00000484176 298 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC013356.1-201ENST00000489027 564 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 RNU6-1004P-201ENST00000516584 111 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 SNORA25.17-201ENST00000517184 124 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC138832.1-201ENST00000522871 556 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 MYL12BP1-201ENST00000569826 507 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 uc_338.22-201ENST00000622722 187 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AL157713.1-201ENST00000379752 1531 ntBASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SCUBE3Q8IX30 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 AP004289.1-201ENST00000436307 2205 ntBASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SCUBE3Q8IX30 GTF2H2B-203ENST00000508065 1432 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms